Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC084781.2-201ENST00000615568 161 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 AC027279.3-201ENST00000625055 122 ntBASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.99□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.27-201ENST00000362540 103 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.428-201ENST00000384078 102 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 RNU2-61P-201ENST00000411069 191 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1199P-201ENST00000411249 104 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 CHEK2P4-201ENST00000450340 246 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-436P-201ENST00000516171 114 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 AC006600.1-201ENST00000572529 153 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 AL132765.2-201ENST00000610812 351 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 AL591926.4-201ENST00000616895 298 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 U6.92-201ENST00000636464 89 ntBASIC0.98□□□□□ -2.25
NDUFAF3Q9BU61 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 SNORA72.1-201ENST00000363485 129 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 SNORA25.9-201ENST00000365087 128 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 RNU6-1283P-201ENST00000365314 105 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 AC114811.1-201ENST00000507207 168 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 VN1R91P-201ENST00000594377 169 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
NDUFAF3Q9BU61 Y_RNA.172-201ENST00000363765 102 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.230-201ENST00000364348 109 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 MTCO2P27-201ENST00000420740 428 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 RPS23P4-201ENST00000487908 423 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-966P-201ENST00000516479 104 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 SNORD116.3-201ENST00000517176 78 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 AC022616.4-201ENST00000522985 181 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 AC022441.3-201ENST00000605737 136 ntBASIC0.96□□□□□ -2.26
NDUFAF3Q9BU61 U8.5-201ENST00000364528 136 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-392P-201ENST00000364926 101 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 MIR452-201ENST00000385020 85 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 MLLT10P1-201ENST00000418346 262 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AC063976.4-201ENST00000421971 163 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AC093019.1-201ENST00000443135 252 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 RPS29P28-201ENST00000446439 141 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AL355375.2-201ENST00000574825 175 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AC005972.2-201ENST00000604690 348 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AC004832.4-201ENST00000608952 331 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.146-201ENST00000363549 102 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.187-201ENST00000363918 113 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.329-201ENST00000365209 107 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.363-201ENST00000365529 113 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.463-201ENST00000384271 102 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 SNORA80D-201ENST00000384488 135 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 AC002429.1-201ENST00000437672 148 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.632-201ENST00000459189 102 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 AC091951.2-201ENST00000500762 203 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 SNORA25.10-201ENST00000515926 124 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 RN7SKP295-201ENST00000517264 153 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 MIR3660-201ENST00000584845 100 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 MIR4762-201ENST00000585261 75 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 AL008636.1-201ENST00000625038 1018 ntBASIC0.94□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-1084P-201ENST00000362498 107 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.70-201ENST00000362886 110 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.226-201ENST00000364337 114 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.253-201ENST00000364562 112 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-1175P-201ENST00000365200 107 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.336-201ENST00000365307 109 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MIR499A-201ENST00000384903 122 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MIR1287-201ENST00000408492 90 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MIR1298-201ENST00000408783 112 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MCFD2P1-201ENST00000417812 300 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 RPS20P10-201ENST00000451209 253 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 RNU1-123P-201ENST00000458950 160 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 AL096861.1-201ENST00000610899 123 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MIR8070-201ENST00000616510 88 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 MIR4272-201ENST00000635924 64 ntBASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NDUFAF3Q9BU61 SNORA72-201ENST00000384339 132 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 MIR522-201ENST00000385071 87 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 SNORA40.6-201ENST00000391153 128 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-710P-201ENST00000410424 105 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 AC005042.3-201ENST00000453230 174 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.661-201ENST00000516003 99 ntBASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.303-201ENST00000364998 94 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.570-201ENST00000384750 101 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms