Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
NDC1Q9BTX1 AC010332.2-201ENST00000613083 1904 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 RNU6-199P-201ENST00000362954 107 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 SNORD45.3-201ENST00000363836 72 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 RNU6-1081P-201ENST00000384537 107 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 RNU6-768P-201ENST00000384683 107 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 RNU6-417P-201ENST00000384712 107 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 MIR513C-201ENST00000401352 84 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 AL512604.1-201ENST00000404812 257 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.43□□□□□ -2.02
NDC1Q9BTX1 RPL30P13-201ENST00000418873 348 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 AL353689.1-201ENST00000438895 199 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.43□□□□□ -2.02
NDC1Q9BTX1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.43□□□□□ -2.02
NDC1Q9BTX1 AL021707.8-201ENST00000609428 183 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
NDC1Q9BTX1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NDC1Q9BTX1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NDC1Q9BTX1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 SNORD114-6-201ENST00000364393 72 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 RNU1-91P-201ENST00000364746 163 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 DEFA7P-201ENST00000382676 285 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 SNORA20-201ENST00000384662 132 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 SNORD37.2-201ENST00000391075 66 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 MIR1261-201ENST00000408659 82 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 RPS29P21-201ENST00000496272 170 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 AC112693.2-201ENST00000556538 232 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 AL049861.1-201ENST00000603130 150 ntBASIC2.42□□□□□ -2.02
NDC1Q9BTX1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.42□□□□□ -2.02
NDC1Q9BTX1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NDC1Q9BTX1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NDC1Q9BTX1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RNU6-22P-201ENST00000384355 107 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 Y_RNA.521-201ENST00000384560 114 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 AC011604.1-201ENST00000545978 196 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 RPL23AP91-201ENST00000569211 455 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 MIR3126-201ENST00000577443 74 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
NDC1Q9BTX1 MIR6844-201ENST00000637122 62 ntBASIC2.41□□□□□ -2.02
NDC1Q9BTX1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NDC1Q9BTX1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NDC1Q9BTX1 RNU1-96P-201ENST00000364163 162 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 SNORA40-201ENST00000388090 126 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 MTND4LP9-201ENST00000427694 174 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 RPS27P1-201ENST00000450552 247 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 RNA5SP320-201ENST00000516263 124 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 RNU6-62P-201ENST00000516526 102 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 MIR3646-201ENST00000578301 84 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 AC073413.2-201ENST00000604332 360 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 AL353149.1-201ENST00000610667 244 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
NDC1Q9BTX1 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 CTSLP2-204ENST00000629029 392 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 MIR338-201ENST00000636369 67 ntBASIC2.4□□□□□ -2.03
NDC1Q9BTX1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
NDC1Q9BTX1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
NDC1Q9BTX1 Y_RNA.393-201ENST00000383936 102 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RNU6-484P-201ENST00000384016 107 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RNA5SP467-201ENST00000391274 118 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 SNORA79-201ENST00000408376 140 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RNU2-51P-201ENST00000410708 197 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RNU7-197P-201ENST00000458836 62 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
NDC1Q9BTX1 MIR2681-201ENST00000581814 105 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NDC1Q9BTX1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NDC1Q9BTX1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
NDC1Q9BTX1 SNORD115-3-201ENST00000363100 82 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNA5SP493-201ENST00000364115 91 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 SNORA70B-201ENST00000384210 135 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU1-148P-201ENST00000384472 162 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 MIR29C-201ENST00000385231 88 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU11-5P-201ENST00000391216 129 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU6-588P-201ENST00000410281 105 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU2-55P-201ENST00000411146 174 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNA5SP492-201ENST00000411330 114 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 CYCSP49-201ENST00000420810 319 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 AC092991.1-201ENST00000477176 376 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU7-99P-201ENST00000516271 62 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 RNU7-128P-201ENST00000517247 62 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
NDC1Q9BTX1 MIR378D2-201ENST00000580636 98 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms