Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-332P-201ENST00000391193 108 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 MTND1P4-201ENST00000435196 415 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AL392103.1-201ENST00000447000 198 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RNU7-87P-201ENST00000459343 62 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RNU6-625P-201ENST00000459412 107 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 SNORD123-201ENST00000459473 70 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 OSBPL9P5-201ENST00000542581 171 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 RN7SKP299-201ENST00000606679 301 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 AL355073.2-201ENST00000612106 557 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 MIR4251-201ENST00000635819 61 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
UPK3BQ9BT76 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.48-201ENST00000362710 103 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.256-201ENST00000364594 104 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 RNU6-908P-201ENST00000410160 94 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.16□□□□□ -2.38
UPK3BQ9BT76 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.16□□□□□ -2.38
UPK3BQ9BT76 Y_RNA.704-201ENST00000516851 102 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 RNU1-54P-201ENST00000517181 120 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 MIR3611-201ENST00000584484 83 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 AC015726.2-201ENST00000620112 122 ntBASIC0.16□□□□□ -2.38
UPK3BQ9BT76 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.38
UPK3BQ9BT76 snoU2-30.1-201ENST00000365012 70 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.557-201ENST00000384680 107 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MIR522-201ENST00000385071 87 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 RNU6-700P-201ENST00000391043 107 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MTND1P26-201ENST00000440488 538 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 AC105313.1-201ENST00000509121 353 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 RNU6-1337P-201ENST00000516525 95 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MIR2115-201ENST00000516657 100 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.714-201ENST00000517065 90 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MTND2P38-201ENST00000522536 667 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MIR6779-201ENST00000617283 64 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 AC091925.1-201ENST00000623204 462 ntBASIC0.15□□□□□ -2.39
UPK3BQ9BT76 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
UPK3BQ9BT76 MIR1302-7-201ENST00000408841 72 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 RNU6-613P-201ENST00000410412 108 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.14□□□□□ -2.39
UPK3BQ9BT76 USP9YP30-201ENST00000430729 455 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 HMGN2P32-201ENST00000444648 269 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.14□□□□□ -2.39
UPK3BQ9BT76 AC019235.1-201ENST00000503847 207 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 AC022616.4-201ENST00000522985 181 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 AC012433.1-201ENST00000588916 398 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 MIR3974-201ENST00000637126 96 ntBASIC0.14□□□□□ -2.39
UPK3BQ9BT76 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNY1P16-201ENST00000363063 111 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.168-201ENST00000363740 102 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU6-1059P-201ENST00000363752 98 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNY3P3-201ENST00000363816 102 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.253-201ENST00000364562 112 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU6-396P-201ENST00000365369 105 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU4-45P-201ENST00000365469 141 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 MIR573-201ENST00000384964 99 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNA5SP95-201ENST00000410319 137 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU2-66P-201ENST00000410650 161 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.13□□□□□ -2.39
UPK3BQ9BT76 U8.19-201ENST00000459095 133 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 U8.22-201ENST00000459141 133 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.13□□□□□ -2.39
UPK3BQ9BT76 AC010486.3-201ENST00000511602 785 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 SNORA40.9-201ENST00000515895 93 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU6-273P-201ENST00000516937 96 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 AC063944.3-201ENST00000609969 533 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 Z99129.1-201ENST00000612510 255 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 MIR8087-201ENST00000612745 78 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 MIR6128-201ENST00000615528 109 ntBASIC0.13□□□□□ -2.39
UPK3BQ9BT76 RNU6-451P-201ENST00000362921 107 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.205-201ENST00000364128 113 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.370-201ENST00000365589 108 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 RNU6-842P-201ENST00000384269 107 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 RNU6-780P-201ENST00000391030 104 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 RNU6-131P-201ENST00000391144 107 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 RNU2-70P-201ENST00000410718 179 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.12□□□□□ -2.39
UPK3BQ9BT76 MIR5701-3-201ENST00000578890 82 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 MIR548AR-201ENST00000582191 57 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 MIR5701-1-201ENST00000585138 82 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 MIR3942-201ENST00000585264 109 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 MIR5701-2-201ENST00000615634 82 ntBASIC0.12□□□□□ -2.39
UPK3BQ9BT76 AC092634.7-201ENST00000621022 103 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms