Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 AL355596.1-201ENST00000565399 3996 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 Y_RNA.617-201ENST00000410920 90 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 AC018634.1-201ENST00000437554 401 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 AL353689.1-201ENST00000438895 199 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 RPS26P45-201ENST00000471748 340 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 ELOCP29-201ENST00000588193 334 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 AC108081.1-201ENST00000604358 221 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 AL359075.3-201ENST00000613288 217 ntBASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ZKSCAN3Q9BRR0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ZKSCAN3Q9BRR0 RNU6-309P-201ENST00000364573 106 ntBASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 SNRPGP10-201ENST00000432323 225 ntBASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 MRPS17P9-201ENST00000511924 393 ntBASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU7-128P-201ENST00000517247 62 ntBASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR4319-201ENST00000577285 85 ntBASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.21□□□□□ -1.9
ZKSCAN3Q9BRR0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORA22-201ENST00000383907 134 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AC233266.1-201ENST00000454518 96 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORD109B-201ENST00000458961 67 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORD109A-201ENST00000459128 67 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-667P-201ENST00000517186 102 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AL353149.1-201ENST00000610667 244 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AC242852.1-201ENST00000612151 96 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AC244015.1-201ENST00000622301 99 ntBASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.2□□□□□ -1.9
ZKSCAN3Q9BRR0 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR592-201ENST00000384959 97 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR548A3-201ENST00000385297 97 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 AF228730.3-201ENST00000436691 102 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-341P-201ENST00000516973 96 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 AL358944.1-201ENST00000528537 144 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR3129-201ENST00000581095 76 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 AC087685.1-201ENST00000587507 141 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 AL022345.2-201ENST00000606307 135 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR6079-201ENST00000635807 62 ntBASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
ZKSCAN3Q9BRR0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.346-201ENST00000365385 112 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORD24-201ENST00000383884 75 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 RNA5SP21-201ENST00000410917 96 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 SRIP3-201ENST00000413200 219 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AC063976.4-201ENST00000421971 163 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AC008507.4-201ENST00000585464 127 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AL121890.5-201ENST00000620848 304 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR338-201ENST00000636369 67 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
ZKSCAN3Q9BRR0 AL136360.1-201ENST00000503377 1900 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 AC062016.1-201ENST00000355719 319 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORD116-21-201ENST00000384507 92 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORA12.1-201ENST00000390873 148 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-220P-201ENST00000390919 107 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 EDDM3CP-201ENST00000415977 425 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 AC003685.2-201ENST00000422795 395 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 RN7SKP19-201ENST00000516016 252 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU1-142P-201ENST00000516682 145 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR3616-201ENST00000584070 92 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
ZKSCAN3Q9BRR0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-888P-201ENST00000363010 101 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-508P-201ENST00000363231 103 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 SNORA1-201ENST00000384107 130 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 MIRLET7F2-201ENST00000385277 83 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 RNA5SP467-201ENST00000391274 118 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 AC018868.1-201ENST00000491307 315 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 RNU6-781P-201ENST00000516377 101 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 MIR3605-201ENST00000583214 100 ntBASIC3.16□□□□□ -1.9
ZKSCAN3Q9BRR0 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms