Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PAAF1Q9BRP4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PAAF1Q9BRP4 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PAAF1Q9BRP4 UBE2WP1-201ENST00000362030 340 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.117-201ENST00000363294 101 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNU6-1048P-201ENST00000364054 107 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNU6-801P-201ENST00000364087 105 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNU6-740P-201ENST00000364734 105 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.416-201ENST00000384014 113 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.447-201ENST00000384184 113 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.489-201ENST00000384410 101 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.518-201ENST00000384552 113 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNA5SP109-201ENST00000391010 116 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2□□□□□ -2.09
PAAF1Q9BRP4 AC245047.3-201ENST00000429428 127 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AC245047.4-201ENST00000433189 144 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AL135790.2-201ENST00000437701 267 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RPS26P45-201ENST00000471748 340 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RPL36AP21-201ENST00000490372 323 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNU6-1291P-201ENST00000516591 104 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 RNU7-116P-201ENST00000516940 62 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AC010900.2-201ENST00000604508 210 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
PAAF1Q9BRP4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
PAAF1Q9BRP4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.65-201ENST00000362846 100 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 SNORA72.4-201ENST00000384174 132 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RNU6-763P-201ENST00000390865 106 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 AL355497.1-201ENST00000406262 551 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RNU2-56P-201ENST00000516826 190 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 BX284668.6-201ENST00000606899 438 ntBASIC1.99□□□□□ -2.09
PAAF1Q9BRP4 RNU6-1272P-201ENST00000362776 107 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RNU6-112P-201ENST00000363599 104 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RNU6-899P-201ENST00000363947 107 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.478-201ENST00000384358 107 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 SNORA17.3-201ENST00000391159 129 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 SNORA26.5-201ENST00000391215 123 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RNU2-14P-201ENST00000411053 191 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RNU7-141P-201ENST00000459304 62 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 RPL23AP54-201ENST00000495129 419 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 AC011604.1-201ENST00000545978 196 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 MIR548AY-201ENST00000617669 107 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 snoU18.1-201ENST00000629629 71 ntBASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PAAF1Q9BRP4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.217-201ENST00000364214 105 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.293-201ENST00000364908 93 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 U8.7-201ENST00000364940 136 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU6-950P-201ENST00000384651 107 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 COX6CP10-201ENST00000416832 224 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 AC104332.1-201ENST00000440471 797 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RPS4XP11-201ENST00000446897 772 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 U8.19-201ENST00000459095 133 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 Y_RNA.641-201ENST00000459414 105 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU6-1023P-201ENST00000516137 106 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU7-115P-201ENST00000516433 55 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 RNU6-341P-201ENST00000516973 96 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 AC024405.2-202ENST00000532731 184 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
PAAF1Q9BRP4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 SNORA72-201ENST00000384339 132 ntBASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 RNA5SP481-201ENST00000516814 122 ntBASIC1.96□□□□□ -2.1
PAAF1Q9BRP4 AC091178.2-201ENST00000584401 117 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms