Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 uc_338.11-201ENST00000619132 160 ntBASIC-0.78□□□□□ -2.53
VPS25Q9BRG1 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 MIR153-2-201ENST00000385225 87 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 RNU2-9P-201ENST00000410194 145 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 MTND4P19-201ENST00000446659 478 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 MIR548AD-201ENST00000584780 82 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 AC006566.1-201ENST00000608943 513 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 AC240442.1-201ENST00000616055 283 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 AC022306.2-201ENST00000617563 647 ntBASIC-0.79□□□□□ -2.54
VPS25Q9BRG1 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 SNORD115-32-201ENST00000364079 82 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RNU6-282P-201ENST00000365357 103 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 SNORD28-201ENST00000384706 75 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 MIR588-201ENST00000384900 83 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RNU6-131P-201ENST00000391144 107 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RPL21P38-201ENST00000418090 167 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 MTATP6P26-201ENST00000445926 662 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 AC105029.1-201ENST00000520250 669 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 MIR548AB-201ENST00000584917 84 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 MIR4999-201ENST00000585029 91 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 AP000240.1-201ENST00000609910 452 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 HULC.1-201ENST00000612720 240 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 Pinc.1-201ENST00000616452 154 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 AL162726.3-218ENST00000636401 95 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 AC007671.2-201ENST00000637344 619 ntBASIC-0.8□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 RNU6-280P-201ENST00000364145 104 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 RNU2-29P-201ENST00000410423 189 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 GMFBP1-201ENST00000467831 427 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AC116353.2-201ENST00000505332 712 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AL157687.1-201ENST00000554853 619 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 AC244669.1-204ENST00000621564 178 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS25Q9BRG1 RNU6-740P-201ENST00000364734 105 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 MIR215-201ENST00000384858 110 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 ELOCP21-201ENST00000412558 336 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 MTCYBP8-201ENST00000422855 651 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 MTATP6P14-201ENST00000455189 673 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 RNU7-180P-201ENST00000459240 63 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 AL157392.4-201ENST00000609756 345 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 AC006927.3-201ENST00000638789 384 ntBASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.82□□□□□ -2.54
VPS25Q9BRG1 RNU6-454P-201ENST00000364292 107 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 SNORD38C-201ENST00000384381 69 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 RNU6-456P-201ENST00000384493 107 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 AL121757.2-201ENST00000611223 313 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 AC134878.1-201ENST00000619901 243 ntBASIC-0.83□□□□□ -2.54
VPS25Q9BRG1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 SNORD14E-201ENST00000364009 85 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 RNU4-84P-201ENST00000364200 139 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 SNORA63C-201ENST00000364578 129 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 SNORA8.3-201ENST00000384679 139 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 MIR563-201ENST00000385080 79 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AC244250.2-201ENST00000418731 148 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 MTCO2P16-201ENST00000436962 677 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 RNU2-13P-201ENST00000515909 113 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 CR383656.4-201ENST00000546909 122 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AC006600.1-201ENST00000572529 153 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 MIR4432-201ENST00000581823 84 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 MIR4677-201ENST00000584153 80 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 PIGPP4-201ENST00000584447 307 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AP001180.6-201ENST00000584918 159 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AC005828.6-201ENST00000606610 232 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AL357078.3-201ENST00000607528 618 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 AL391099.1-201ENST00000624635 187 ntBASIC-0.84□□□□□ -2.54
VPS25Q9BRG1 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 RNU6-933P-201ENST00000384424 107 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 RNU4-83P-201ENST00000410863 133 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 AC236972.2-201ENST00000434979 310 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 SNRPGP14-201ENST00000435400 219 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 AC009961.2-201ENST00000435771 251 ntBASIC-0.85□□□□□ -2.55
VPS25Q9BRG1 MTCO1P29-201ENST00000496868 288 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms