Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORD115-16-201ENST00000363887 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-6-201ENST00000363942 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-42-201ENST00000364273 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-15-201ENST00000364809 81 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-1-201ENST00000364961 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-26-201ENST00000365067 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-10-201ENST00000365073 81 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-43-201ENST00000365503 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-36-201ENST00000365629 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 Y_RNA.377-201ENST00000365644 108 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 Y_RNA.494-201ENST00000384432 111 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU6-1072P-201ENST00000384703 107 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU6-443P-201ENST00000384780 107 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU1-101P-201ENST00000391171 127 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU7-113P-201ENST00000459273 62 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RN7SL504P-201ENST00000494496 287 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU6-267P-201ENST00000516714 103 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 RNU7-143P-201ENST00000516781 65 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 AC090821.2-201ENST00000523552 176 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.55□□□□□ -1.84
USB1Q9BQ65 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USB1Q9BQ65 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USB1Q9BQ65 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USB1Q9BQ65 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USB1Q9BQ65 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USB1Q9BQ65 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
USB1Q9BQ65 SNORA25B-201ENST00000365507 128 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 RNA5SP283-201ENST00000365604 119 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
USB1Q9BQ65 RNU6-887P-201ENST00000410660 100 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.54□□□□□ -1.84
USB1Q9BQ65 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 RNU6-1116P-201ENST00000517269 99 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 MIR4666B-201ENST00000578142 81 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USB1Q9BQ65 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USB1Q9BQ65 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USB1Q9BQ65 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.54□□□□□ -1.84
USB1Q9BQ65 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.53□□□□□ -1.84
USB1Q9BQ65 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
USB1Q9BQ65 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USB1Q9BQ65 Y_RNA.171-201ENST00000363760 102 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 RNA5SP97-201ENST00000365006 84 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 RNU6-1296P-201ENST00000383879 107 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 Y_RNA.437-201ENST00000384113 113 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 RNU6-424P-201ENST00000384367 105 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 SNORD77B-201ENST00000391112 67 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 STAG3L5P-204ENST00000443759 179 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 RNU7-171P-201ENST00000459581 62 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 RNU6-521P-201ENST00000516663 105 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.53□□□□□ -1.84
USB1Q9BQ65 AC244205.2-202ENST00000635781 342 ntBASIC3.53□□□□□ -1.84
USB1Q9BQ65 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USB1Q9BQ65 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USB1Q9BQ65 SNORD35B-201ENST00000363660 87 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 RNU6-219P-201ENST00000364728 107 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 Y_RNA.313-201ENST00000365095 103 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 RNU6-1201P-201ENST00000384227 107 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 Y_RNA.467-201ENST00000384297 102 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 RNU6-616P-201ENST00000384353 107 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 RNA5SP109-201ENST00000391010 116 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 SNORA3C-201ENST00000408792 125 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 AL135938.1-201ENST00000443141 297 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 RNU6-1018P-201ENST00000516577 106 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 IGLV3-17-201ENST00000519099 244 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 MIR6868-201ENST00000611215 58 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 MIR6875-201ENST00000617506 72 ntBASIC3.52□□□□□ -1.85
USB1Q9BQ65 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.52□□□□□ -1.85
USB1Q9BQ65 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USB1Q9BQ65 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USB1Q9BQ65 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USB1Q9BQ65 MIR372-201ENST00000362225 67 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 RNU1-18P-201ENST00000363062 164 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 MIR1267-201ENST00000408723 78 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.51□□□□□ -1.85
USB1Q9BQ65 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.51□□□□□ -1.85
USB1Q9BQ65 RNU7-45P-201ENST00000459460 63 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 RN7SL93P-201ENST00000463035 293 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 RNU6-857P-201ENST00000515893 110 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USB1Q9BQ65 MIR6500-201ENST00000622700 86 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USB1Q9BQ65 AC096644.4-201ENST00000563417 2912 ntBASIC3.51□□□□□ -1.85
USB1Q9BQ65 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USB1Q9BQ65 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USB1Q9BQ65 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USB1Q9BQ65 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USB1Q9BQ65 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USB1Q9BQ65 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USB1Q9BQ65 SNORA37-201ENST00000384504 129 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 MIR1262-201ENST00000408276 93 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 SNORA3.3-201ENST00000408712 125 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 AC003685.2-201ENST00000422795 395 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.5□□□□□ -1.85
USB1Q9BQ65 AC015922.2-201ENST00000435593 184 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms