Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC127455.1-201ENST00000565496 145 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AC005972.2-201ENST00000604690 348 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 MIR548AY-201ENST00000617669 107 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 AC068647.2-201ENST00000637380 353 ntBASIC1.57□□□□□ -2.16
VGLL1Q99990 RNU6-1020P-201ENST00000363684 107 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 Y_RNA.180-201ENST00000363867 113 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 RNU6-209P-201ENST00000384118 107 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 MIR526A2-201ENST00000390198 65 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 RNU6-381P-201ENST00000391259 108 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 RN7SKP51-201ENST00000410781 304 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 AL356320.1-201ENST00000429616 163 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 RPS4XP11-201ENST00000446897 772 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 ATP5J2P3-201ENST00000451550 258 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 AC074198.2-201ENST00000508153 258 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 SCARNA8-201ENST00000515924 131 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 AC091178.2-201ENST00000584401 117 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 MIR6852-201ENST00000621699 66 ntBASIC1.56□□□□□ -2.16
VGLL1Q99990 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VGLL1Q99990 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.56□□□□□ -2.16
VGLL1Q99990 RNU1-58P-201ENST00000362413 163 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 Y_RNA.233-201ENST00000364407 101 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 SNORA11.4-201ENST00000408823 129 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 SNORA36B-201ENST00000410438 131 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
VGLL1Q99990 AC245102.2-201ENST00000448956 180 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.55□□□□□ -2.16
VGLL1Q99990 RPS26P45-201ENST00000471748 340 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 YWHAEP4-201ENST00000505390 198 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
VGLL1Q99990 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 RNU7-99P-201ENST00000516271 62 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 RNU6-861P-201ENST00000516745 106 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 AC026271.5-201ENST00000577873 130 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 POLR3GP1-201ENST00000594073 261 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 AC072026.1-201ENST00000605023 201 ntBASIC1.55□□□□□ -2.16
VGLL1Q99990 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
VGLL1Q99990 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VGLL1Q99990 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
VGLL1Q99990 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU4-82P-201ENST00000362443 140 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-862P-201ENST00000362804 105 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-674P-201ENST00000363831 107 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 Y_RNA.240-201ENST00000364469 95 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-144P-201ENST00000383951 107 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-136P-201ENST00000384663 107 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 MIR29C-201ENST00000385231 88 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 HMGN2P39-201ENST00000398005 273 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 SNORD23.1-201ENST00000408212 104 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 MIR1253-201ENST00000408273 105 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 UBE2DNL-203ENST00000474922 222 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-1219P-201ENST00000516143 112 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-1146P-201ENST00000516282 102 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 RNU6-453P-201ENST00000516819 85 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.54□□□□□ -2.16
VGLL1Q99990 AL031274.2-201ENST00000599419 203 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 AC073413.2-201ENST00000604332 360 ntBASIC1.54□□□□□ -2.16
VGLL1Q99990 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.54□□□□□ -2.16
VGLL1Q99990 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.54□□□□□ -2.16
VGLL1Q99990 Y_RNA.24-201ENST00000362508 103 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 SNORD115-3-201ENST00000363100 82 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU6-23P-201ENST00000363283 107 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU6-1205P-201ENST00000363625 106 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU4-17P-201ENST00000365598 141 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 SNORA72-201ENST00000384339 132 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 Y_RNA.571-201ENST00000384753 98 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 MIR518A2-201ENST00000384966 87 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU6-383P-201ENST00000410864 94 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VGLL1Q99990 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.53□□□□□ -2.16
VGLL1Q99990 MIR3126-201ENST00000577443 74 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 MIR5688-201ENST00000580619 83 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 AC007229.1-201ENST00000590455 412 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 AL929325.1-201ENST00000603096 117 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 AL021707.8-201ENST00000609428 183 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 U6.106-201ENST00000636360 105 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.53□□□□□ -2.16
VGLL1Q99990 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
VGLL1Q99990 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 Y_RNA.7-201ENST00000362352 102 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 Y_RNA.238-201ENST00000364441 102 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 Y_RNA.293-201ENST00000364908 93 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RNU6-969P-201ENST00000383900 105 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 SNORA8.3-201ENST00000384679 139 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 MIR597-201ENST00000384968 97 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RNU2-2P-201ENST00000410396 191 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RNU6-1186P-201ENST00000410429 97 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RNU5E-9P-201ENST00000411164 104 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 AC010154.1-201ENST00000425857 269 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 AL606517.2-201ENST00000442855 241 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RPS27P1-201ENST00000450552 247 ntBASIC1.52□□□□□ -2.17
VGLL1Q99990 RNA5SP233-201ENST00000459153 113 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms