Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
VRK1Q99986 RNU6-1291P-201ENST00000516591 104 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
VRK1Q99986 AP002004.2-201ENST00000531656 154 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 AP002392.1-201ENST00000537692 208 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 AC072026.1-201ENST00000605023 201 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 AC098479.1-201ENST00000609225 154 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
VRK1Q99986 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
VRK1Q99986 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
VRK1Q99986 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
VRK1Q99986 Y_RNA.7-201ENST00000362352 102 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 Y_RNA.121-201ENST00000363309 113 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 RNU4-10P-201ENST00000364383 140 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 RNU6-47P-201ENST00000383866 107 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 RNA5SP496-201ENST00000391240 109 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 RNU6-381P-201ENST00000391259 108 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 COX6CP10-201ENST00000416832 224 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 AL513328.1-201ENST00000446460 224 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 RN7SKP164-201ENST00000516138 266 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
VRK1Q99986 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VRK1Q99986 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VRK1Q99986 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VRK1Q99986 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VRK1Q99986 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
VRK1Q99986 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.2□□□□□ -2.06
VRK1Q99986 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
VRK1Q99986 Y_RNA.267-201ENST00000364679 109 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 RNU6-969P-201ENST00000383900 105 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 MIR520A-201ENST00000384862 85 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AL512604.1-201ENST00000404812 257 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AC245047.3-201ENST00000429428 127 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.2□□□□□ -2.06
VRK1Q99986 AL606517.2-201ENST00000442855 241 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AC233266.1-201ENST00000454518 96 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.2□□□□□ -2.06
VRK1Q99986 AC242852.1-201ENST00000612151 96 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 AC244015.1-201ENST00000622301 99 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.2□□□□□ -2.06
VRK1Q99986 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
VRK1Q99986 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VRK1Q99986 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VRK1Q99986 RNU6-112P-201ENST00000363599 104 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 RNU6-103P-201ENST00000363686 107 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 RNU6-296P-201ENST00000384608 107 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 Y_RNA.571-201ENST00000384753 98 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 MIR616-201ENST00000385293 97 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 MIR1278-201ENST00000408753 81 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 RNU6-383P-201ENST00000410864 94 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 RN7SKP101-201ENST00000411376 320 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.19□□□□□ -2.06
VRK1Q99986 PIGPP3-201ENST00000425307 415 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 AL391903.3-201ENST00000612158 163 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 FTX_2.1-201ENST00000618816 94 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
VRK1Q99986 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VRK1Q99986 SNORA1B-201ENST00000362535 133 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 snoU2_19.4-201ENST00000364329 80 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 Y_RNA.233-201ENST00000364407 101 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 Y_RNA.238-201ENST00000364441 102 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNU6-1080P-201ENST00000383982 107 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNU6-950P-201ENST00000384651 107 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 Y_RNA.572-201ENST00000384757 98 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNA5SP109-201ENST00000391010 116 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 AL049830.1-201ENST00000468034 425 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 AC107393.1-201ENST00000512403 346 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 RNU7-28P-201ENST00000516759 62 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 AL021707.8-201ENST00000609428 183 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 MIR8054-201ENST00000620877 86 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
VRK1Q99986 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.18□□□□□ -2.06
VRK1Q99986 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VRK1Q99986 AC008555.8-201ENST00000623602 2168 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
VRK1Q99986 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
VRK1Q99986 Y_RNA.796-201ENST00000364268 102 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 Y_RNA.229-201ENST00000364347 113 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RNU4-41P-201ENST00000364426 143 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 Y_RNA.799-201ENST00000364992 102 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RNY3P5-201ENST00000384127 102 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RNU4-70P-201ENST00000384579 139 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 MIR27B-201ENST00000385129 97 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 Y_RNA.621-201ENST00000411065 96 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RN7SL429P-201ENST00000479090 223 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RN7SL489P-201ENST00000486185 223 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RN7SL327P-201ENST00000488659 223 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 HMGN1P7-201ENST00000491722 313 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RNA5SP282-201ENST00000516355 108 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RNU2-56P-201ENST00000516826 190 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 RN7SL853P-201ENST00000617250 223 ntBASIC2.17□□□□□ -2.06
VRK1Q99986 U4.3-201ENST00000621047 82 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms