Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.04□□□□□ -2.58
COL12A1Q99715 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.04□□□□□ -2.58
COL12A1Q99715 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
COL12A1Q99715 RNY4P25-201ENST00000459254 96 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL12A1Q99715 AL139022.2-201ENST00000606934 443 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 SNORA32.2-201ENST00000384049 122 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 SNORD116-20-201ENST00000384529 92 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 AC018880.2-201ENST00000414265 201 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.05□□□□□ -2.58
COL12A1Q99715 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.05□□□□□ -2.58
COL12A1Q99715 AL158211.4-201ENST00000606988 584 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 AC022306.2-201ENST00000617563 647 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU6-212P-201ENST00000362642 104 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU6-216P-201ENST00000363282 104 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 U8.17-201ENST00000391292 132 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.05□□□□□ -2.58
COL12A1Q99715 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.05□□□□□ -2.58
COL12A1Q99715 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU7-41P-201ENST00000515917 61 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 SNORA31.14-201ENST00000516728 116 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU6-703P-201ENST00000516946 107 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 RNU7-156P-201ENST00000517214 74 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 AC018889.1-201ENST00000605372 397 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 AL512506.1-201ENST00000613918 449 ntBASIC-1.05□□□□□ -2.58
COL12A1Q99715 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 RNU6-101P-201ENST00000410323 104 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC114491.1-201ENST00000416095 246 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC013262.1-201ENST00000426710 252 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.06□□□□□ -2.58
COL12A1Q99715 RNU7-12P-201ENST00000516030 62 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 SNORA25.13-201ENST00000516395 103 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 POLR3GP1-201ENST00000594073 261 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AL117336.2-201ENST00000602435 335 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 MIR526A1-201ENST00000384897 85 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 FGF7P6-202ENST00000451282 293 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.06□□□□□ -2.58
COL12A1Q99715 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.06□□□□□ -2.58
COL12A1Q99715 AL022154.1-201ENST00000604698 785 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.06□□□□□ -2.58
COL12A1Q99715 AL049777.1-201ENST00000622740 518 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 AC097460.3-201ENST00000623099 442 ntBASIC-1.06□□□□□ -2.58
COL12A1Q99715 RNA5SP26-201ENST00000362406 119 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 SNORA33-201ENST00000363664 130 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-695P-201ENST00000391157 104 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 SNORA26.5-201ENST00000391215 123 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-927P-201ENST00000516199 100 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 AP001189.2-201ENST00000527320 189 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.07□□□□□ -2.58
COL12A1Q99715 AC022217.4-201ENST00000604389 163 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 AL161798.1-201ENST00000604630 131 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 AC124016.2-201ENST00000610058 665 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 MIR376A2-201ENST00000636782 80 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 SNORD115-34-201ENST00000362441 82 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 SNORA1B-201ENST00000362535 133 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 SNORA12.2-201ENST00000391040 156 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 MIR891A-201ENST00000401237 79 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.07□□□□□ -2.58
COL12A1Q99715 U8.19-201ENST00000459095 133 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 MIR8068-201ENST00000618032 68 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-397P-201ENST00000516226 104 ntBASIC-1.07□□□□□ -2.58
COL12A1Q99715 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.07□□□□□ -2.58
COL12A1Q99715 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.07□□□□□ -2.58
COL12A1Q99715 RNU6-973P-201ENST00000364690 107 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU6-535P-201ENST00000384722 107 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU6-440P-201ENST00000390882 105 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 SNORA26.4-201ENST00000391188 123 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 MIR1185-2-201ENST00000408687 86 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU6-141P-201ENST00000410499 105 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AP001372.4-201ENST00000524889 472 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC020661.2-201ENST00000560114 134 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC090517.1-201ENST00000569307 266 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AP000753.3-201ENST00000604083 169 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC009994.1-201ENST00000606889 253 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU1-141P-201ENST00000364623 158 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC106883.1-201ENST00000418805 562 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC245047.3-201ENST00000429428 127 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 SEPT14P24-201ENST00000447236 180 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU7-59P-201ENST00000459101 61 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 SEPT14P4-201ENST00000513445 186 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms