Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 Y_RNA.529-201ENST00000384586 119 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 SNORD19B-201ENST00000459623 84 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 SNORA25.10-201ENST00000515926 124 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 RNU6-507P-201ENST00000516045 100 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 RN7SKP295-201ENST00000517264 153 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 AC022441.3-201ENST00000605737 136 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 AC104985.2-201ENST00000620598 500 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.70-201ENST00000362886 110 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 RNU4-62P-201ENST00000410125 130 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AC108667.1-201ENST00000428618 249 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 LINC01399-202ENST00000458450 244 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AC093027.1-201ENST00000546698 429 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AC092447.9-201ENST00000603395 144 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AL008636.1-201ENST00000625038 1018 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 AC027279.3-201ENST00000625055 122 ntBASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RAB3IPQ96QF0 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 RNU6-1009P-201ENST00000390996 107 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 FGF7P4-201ENST00000509595 295 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 AC005972.2-201ENST00000604690 348 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 RBM11P1-201ENST00000604951 799 ntBASIC1.14□□□□□ -2.23
RAB3IPQ96QF0 RNU6-1115P-201ENST00000362490 106 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.58-201ENST00000362807 102 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.154-201ENST00000363624 102 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RNY3P1-201ENST00000365085 102 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RNY3-201ENST00000365484 102 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.496-201ENST00000384444 101 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RNU6-855P-201ENST00000410395 104 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 MCFD2P1-201ENST00000417812 300 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RPS20P10-201ENST00000451209 253 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RNU7-152P-201ENST00000458982 64 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 AL096861.1-201ENST00000610899 123 ntBASIC1.13□□□□□ -2.23
RAB3IPQ96QF0 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 MIR452-201ENST00000385020 85 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 MIR516B2-201ENST00000385190 85 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 MIR1298-201ENST00000408783 112 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 RNA5SP247-201ENST00000411181 105 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC063976.4-201ENST00000421971 163 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC005042.3-201ENST00000453230 174 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC022616.4-201ENST00000522985 181 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 MIR4498-201ENST00000577599 66 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 AC112487.2-201ENST00000637950 304 ntBASIC1.12□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.39-201ENST00000362620 98 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.238-201ENST00000364441 102 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 U8.5-201ENST00000364528 136 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.263-201ENST00000364659 114 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 MTND1P14-201ENST00000427400 950 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC236972.2-201ENST00000434979 310 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC009474.2-201ENST00000451383 136 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 MIR548S-201ENST00000581352 82 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 MIR5188-201ENST00000583467 113 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 RPS29P30-201ENST00000600975 111 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.772-201ENST00000606692 102 ntBASIC1.11□□□□□ -2.23
RAB3IPQ96QF0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 MIR522-201ENST00000385071 87 ntBASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 AL160004.2-201ENST00000432935 350 ntBASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 MTND5P20-201ENST00000448677 143 ntBASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
RAB3IPQ96QF0 RNU4-77P-201ENST00000516692 156 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms