Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RPS4XP11-201ENST00000446897 772 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 MTND5P22-201ENST00000458380 195 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 AL049830.1-201ENST00000468034 425 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC138Q96M89 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC138Q96M89 AC007742.2-201ENST00000618226 398 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC138Q96M89 Y_RNA.4-201ENST00000362333 112 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 RNA5SP99-201ENST00000364020 114 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 Y_RNA.418-201ENST00000384029 102 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 MIR215-201ENST00000384858 110 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 SNORA53-201ENST00000391141 249 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 MTND4LP30-201ENST00000454092 297 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 PRR13P7-201ENST00000605538 430 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 AC021506.2-201ENST00000612354 169 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
CCDC138Q96M89 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC138Q96M89 MIR424-201ENST00000362227 98 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 Y_RNA.226-201ENST00000364337 114 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 RNU6-1323P-201ENST00000384025 107 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 Y_RNA.466-201ENST00000384294 113 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 MIR194-1-201ENST00000384892 85 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 RNA5SP482-201ENST00000391269 118 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 MIR1287-201ENST00000408492 90 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC138Q96M89 AL161935.2-201ENST00000414627 60 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 AC099513.1-201ENST00000490423 301 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 RNU6-635P-201ENST00000516651 102 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 RNU2-31P-201ENST00000516954 155 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 AC011604.1-201ENST00000545978 196 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 AC037487.3-201ENST00000606668 112 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 AC068647.2-201ENST00000637380 353 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
CCDC138Q96M89 RNU6-326P-201ENST00000365480 107 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 Y_RNA.541-201ENST00000384640 113 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 RNU6-713P-201ENST00000384761 107 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 Y_RNA.621-201ENST00000411065 96 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC138Q96M89 MTATP8P1-201ENST00000467115 207 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 RNU6-191P-201ENST00000516295 94 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 AC136628.3-201ENST00000521868 290 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 AL360085.1-201ENST00000604713 532 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 AC073349.3-201ENST00000617616 186 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
CCDC138Q96M89 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCDC138Q96M89 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCDC138Q96M89 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC138Q96M89 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CCDC138Q96M89 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 Y_RNA.84-201ENST00000363011 104 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 Y_RNA.459-201ENST00000384251 102 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 SNORA72-201ENST00000384339 132 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC138Q96M89 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC138Q96M89 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 PGBD4P5-201ENST00000445958 426 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 SCARNA15.1-201ENST00000516384 125 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
CCDC138Q96M89 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC138Q96M89 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC138Q96M89 ICE2P2-201ENST00000483823 2787 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 SNORA12.1-201ENST00000390873 148 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 MTCO1P5-201ENST00000433573 344 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 AL135790.2-201ENST00000437701 267 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 RNU6-327P-201ENST00000516270 127 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 POLR3GP1-201ENST00000594073 261 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 AC136443.5-201ENST00000603741 370 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 AL513423.1-201ENST00000621695 132 ntBASIC1.92□□□□□ -2.1
CCDC138Q96M89 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC138Q96M89 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC138Q96M89 RNU6-238P-201ENST00000363313 106 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 Y_RNA.162-201ENST00000363683 102 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 Y_RNA.176-201ENST00000363815 109 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 RNU6-1080P-201ENST00000383982 107 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 RNU6-514P-201ENST00000384208 107 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 MIR764-201ENST00000390811 85 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 MIR548F4-201ENST00000408515 105 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 RPL30P13-201ENST00000418873 348 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 HSPE1P24-201ENST00000450782 238 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 OR9P1P-201ENST00000496431 281 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 AL117187.1-201ENST00000555482 181 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC138Q96M89 AP003357.1-201ENST00000604497 148 ntBASIC1.91□□□□□ -2.1
CCDC138Q96M89 SNORA25.1-201ENST00000362326 128 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 RNU6-801P-201ENST00000364087 105 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 Y_RNA.508-201ENST00000384502 114 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 Y_RNA.574-201ENST00000384766 95 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 MIR1289-2-201ENST00000408360 111 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 RNU6-1203P-201ENST00000410703 110 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms