Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC005786.1-201ENST00000588553 154 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL359075.3-201ENST00000613288 217 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AL078604.3-201ENST00000615580 211 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 AC013791.1-201ENST00000616619 62 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
VPS50Q96JG6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VPS50Q96JG6 Y_RNA.515-201ENST00000384535 112 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 SNORA8-201ENST00000384574 139 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS50Q96JG6 RPS4XP11-201ENST00000446897 772 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS50Q96JG6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNU6-138P-201ENST00000515952 107 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNU6-1278P-201ENST00000516130 107 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNU7-115P-201ENST00000516433 55 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AC024405.2-202ENST00000532731 184 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 MIR5094-201ENST00000578766 85 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AC005972.2-201ENST00000604690 348 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 MIR6715A-201ENST00000615929 79 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AC073349.3-201ENST00000617616 186 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 AL365265.1-201ENST00000621045 234 ntBASIC2.12□□□□□ -2.07
VPS50Q96JG6 Y_RNA.200-201ENST00000364018 102 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS50Q96JG6 RNA5SP323-201ENST00000391094 133 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS50Q96JG6 AC091021.1-201ENST00000468051 388 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 RPS29P21-201ENST00000496272 170 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 RNU1-142P-201ENST00000516682 145 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS50Q96JG6 POLR3GP1-201ENST00000594073 261 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 MIR548AY-201ENST00000617669 107 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
VPS50Q96JG6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
VPS50Q96JG6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
VPS50Q96JG6 Y_RNA.199-201ENST00000364014 102 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS50Q96JG6 RPL36AP21-201ENST00000490372 323 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 AP003357.1-201ENST00000604497 148 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS50Q96JG6 ZNF702P-202ENST00000434269 1966 ntBASIC2.1□□□□□ -2.07
VPS50Q96JG6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS50Q96JG6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS50Q96JG6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS50Q96JG6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VPS50Q96JG6 Y_RNA.83-201ENST00000363005 113 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-899P-201ENST00000363947 107 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU4-13P-201ENST00000364019 141 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-200P-201ENST00000364743 107 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 Y_RNA.293-201ENST00000364908 93 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-1291P-201ENST00000516591 104 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 AC084364.2-201ENST00000546924 395 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 MIR3668-201ENST00000582138 75 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 AC091178.2-201ENST00000584401 117 ntBASIC2.09□□□□□ -2.07
VPS50Q96JG6 RNU6-653P-201ENST00000363074 106 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 Y_RNA.297-201ENST00000364950 91 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 Y_RNA.304-201ENST00000365011 112 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 Y_RNA.308-201ENST00000365043 101 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 RNU6-47P-201ENST00000383866 107 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 RNU6-493P-201ENST00000391321 108 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 SNORA36B-201ENST00000410438 131 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 RNU6-383P-201ENST00000410864 94 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 snoU13.15-201ENST00000459407 104 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 RPS26P45-201ENST00000471748 340 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 RPL23AP54-201ENST00000495129 419 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC127455.1-201ENST00000565496 145 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AL929325.1-201ENST00000603096 117 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC022217.4-201ENST00000604389 163 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 MIR6079-201ENST00000635807 62 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 AC018630.2-201ENST00000534866 2403 ntBASIC2.08□□□□□ -2.08
VPS50Q96JG6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms