Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-1299P-201ENST00000516316 100 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 RNA5SP153-201ENST00000516498 76 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.86□□□□□ -1.95
BRF1Q92994 RPL23AP91-201ENST00000569211 455 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 AC007336.1-201ENST00000576365 3828 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 AL049861.1-201ENST00000603130 150 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
BRF1Q92994 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
BRF1Q92994 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 Y_RNA.432-201ENST00000384087 111 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 MIR562-201ENST00000384894 95 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 RNU6-1168P-201ENST00000390831 104 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 SNORA75.5-201ENST00000391291 81 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 AL359511.1-201ENST00000402970 211 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.85□□□□□ -1.95
BRF1Q92994 AC023449.1-201ENST00000454464 154 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 AC092991.1-201ENST00000477176 376 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 RN7SL636P-201ENST00000497504 294 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 RNU6-1096P-201ENST00000517089 102 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.85□□□□□ -1.95
BRF1Q92994 AC091178.2-201ENST00000584401 117 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 AC073413.2-201ENST00000604332 360 ntBASIC2.85□□□□□ -1.95
BRF1Q92994 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.85□□□□□ -1.95
BRF1Q92994 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
BRF1Q92994 MIR21-201ENST00000362134 72 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 RNU6-1209P-201ENST00000363655 107 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 SNORD114-6-201ENST00000364393 72 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 Y_RNA.420-201ENST00000384043 110 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
BRF1Q92994 RPS15AP28-201ENST00000435088 386 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 AC104389.3-201ENST00000445629 235 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 RNU6-313P-201ENST00000516317 112 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 AC097639.2-201ENST00000603159 172 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 AL359075.3-201ENST00000613288 217 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 AP001340.1-201ENST00000624405 217 ntBASIC2.84□□□□□ -1.95
BRF1Q92994 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
BRF1Q92994 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
BRF1Q92994 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
BRF1Q92994 Y_RNA.111-201ENST00000363248 100 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 RNU6-978P-201ENST00000364371 103 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 Y_RNA.251-201ENST00000364551 99 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 MIR539-201ENST00000365690 78 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 RNU6-160P-201ENST00000384591 107 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 RNU6-1186P-201ENST00000410429 97 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 AC018634.1-201ENST00000437554 401 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 RNU6-1041P-201ENST00000516254 102 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 RNU6-126P-201ENST00000516685 103 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 AL031274.2-201ENST00000599419 203 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 AC120024.3-201ENST00000603167 156 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 AL137847.3-201ENST00000611521 109 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 U6.108-201ENST00000637764 58 ntBASIC2.83□□□□□ -1.96
BRF1Q92994 AC018630.2-201ENST00000534866 2403 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BRF1Q92994 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRF1Q92994 RNU6-525P-201ENST00000363685 104 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 RNU1-51P-201ENST00000365345 176 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 RNU6-1138P-201ENST00000365359 106 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 Y_RNA.542-201ENST00000384641 111 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 MIR515-2-201ENST00000384883 83 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 MIR515-1-201ENST00000384884 83 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BRF1Q92994 RNU6-1154P-201ENST00000391001 104 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AL117342.1-201ENST00000404861 406 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 MIR1262-201ENST00000408276 93 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 RNU6-588P-201ENST00000410281 105 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AC245047.4-201ENST00000433189 144 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AC008267.6-201ENST00000441664 139 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AC026436.1-201ENST00000510537 270 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AL358944.1-201ENST00000528537 144 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 AC067747.1-201ENST00000608026 250 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 TUG1_4.1-201ENST00000619464 181 ntBASIC2.82□□□□□ -1.96
BRF1Q92994 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRF1Q92994 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 RNU6-1080P-201ENST00000383982 107 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 SNORA20-201ENST00000384662 132 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 RNA5SP467-201ENST00000391274 118 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 ATP5J2P3-201ENST00000451550 258 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 RNU6-341P-201ENST00000516973 96 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 MIR4662B-201ENST00000579498 81 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 AL365222.1-201ENST00000614661 98 ntBASIC2.81□□□□□ -1.96
BRF1Q92994 RNU6-1082P-201ENST00000364574 107 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 Y_RNA.634-201ENST00000364811 113 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 SNORA22C-201ENST00000384614 134 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 RNU6-1072P-201ENST00000384703 107 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 RNU6-443P-201ENST00000384780 107 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 SNORA26-201ENST00000391286 122 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 RPS26P45-201ENST00000471748 340 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 OR9P1P-201ENST00000496431 281 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 AC024995.1-201ENST00000523014 93 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.8□□□□□ -1.96
BRF1Q92994 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 JPX_2.1-201ENST00000614161 69 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 MIR1291-201ENST00000627649 87 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
BRF1Q92994 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 CST2P1-201ENST00000425770 87 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 RNU1-142P-201ENST00000516682 145 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 RNU6-971P-201ENST00000516920 106 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 AC026271.5-201ENST00000577873 130 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms