Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
CCHCR1Q8TD31 MIR449A-201ENST00000362113 91 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RNU4-82P-201ENST00000362443 140 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.150-201ENST00000363562 102 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RNU6-136P-201ENST00000384663 107 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RNU6-376P-201ENST00000384731 106 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 RNU1-142P-201ENST00000516682 145 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.7-201ENST00000362352 102 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.121-201ENST00000363309 113 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 snoU2_19.4-201ENST00000364329 80 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.270-201ENST00000364693 104 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.571-201ENST00000384753 98 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 MIR520G-201ENST00000385064 90 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 RNU6-437P-201ENST00000459408 95 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 RNU6-861P-201ENST00000516745 106 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 MIR4724-201ENST00000579485 89 ntBASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.24-201ENST00000362508 103 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.238-201ENST00000364441 102 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.240-201ENST00000364469 95 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 RPL23AP54-201ENST00000495129 419 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 RN7SKP164-201ENST00000516138 266 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 U6.106-201ENST00000636360 105 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 AC100821.1-201ENST00000523153 2479 ntBASIC2.35□□□□□ -2.03
CCHCR1Q8TD31 AC018630.2-201ENST00000534866 2403 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 RNU6-969P-201ENST00000383900 105 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 Y_RNA.572-201ENST00000384757 98 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 MIR4513-201ENST00000581077 86 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 MIR6079-201ENST00000635807 62 ntBASIC2.34□□□□□ -2.03
CCHCR1Q8TD31 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 MIR367-201ENST00000362299 68 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 SNORA8-201ENST00000384574 139 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNU4-70P-201ENST00000384579 139 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 MIR616-201ENST00000385293 97 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP323-201ENST00000391094 133 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 MIR1278-201ENST00000408753 81 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNU6-383P-201ENST00000410864 94 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 AC091021.1-201ENST00000468051 388 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1219P-201ENST00000516143 112 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNU6-341P-201ENST00000516973 96 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1096P-201ENST00000517089 102 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 AC011604.1-201ENST00000545978 196 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 AL929325.1-201ENST00000603096 117 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 AL391903.3-201ENST00000612158 163 ntBASIC2.33□□□□□ -2.04
CCHCR1Q8TD31 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 RNU6-103P-201ENST00000363686 107 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.229-201ENST00000364347 113 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 MIR597-201ENST00000384968 97 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 RNU11-3P-201ENST00000391111 133 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 RNU2-2P-201ENST00000410396 191 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP508-201ENST00000411327 119 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 HMGN2P3-201ENST00000433603 273 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 HMGN2P5-201ENST00000436882 273 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 SCARNA8-201ENST00000515924 131 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 RNU2-4P-201ENST00000606190 192 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
CCHCR1Q8TD31 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP289-201ENST00000362332 137 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.75-201ENST00000362927 97 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.203-201ENST00000364106 102 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1062P-201ENST00000383908 107 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.464-201ENST00000384282 110 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RN7SKP51-201ENST00000410781 304 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RN7SKP101-201ENST00000411376 320 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNU6-717P-201ENST00000459076 104 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNU7-94P-201ENST00000459576 63 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.662-201ENST00000516028 97 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP281-201ENST00000516504 135 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 AL358944.1-201ENST00000528537 144 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 AL021707.8-201ENST00000609428 183 ntBASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCHCR1Q8TD31 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 935.8 ms