Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNORA31.1-201ENST00000515993 133 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.659-201ENST00000515994 113 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 SNORA31.5-201ENST00000516190 133 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 MIR4439-201ENST00000583746 80 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.773-201ENST00000607168 90 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 AC090115.4-201ENST00000609970 188 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 MAPK10-373ENST00000641983 6772 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 AC018630.2-201ENST00000534866 2403 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 SNORA14A-201ENST00000364773 135 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.316-201ENST00000365118 111 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 RNY1P4-201ENST00000384595 115 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 HMGN2P7-201ENST00000456186 273 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 RN7SL504P-201ENST00000494496 287 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 AL355596.1-201ENST00000565399 3996 ntBASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-3Q8TAU0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 RNU1-70P-201ENST00000362618 164 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.351-201ENST00000365436 96 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 MIR889-201ENST00000401280 79 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 AL353813.1-201ENST00000440700 253 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 SNORA31.21-201ENST00000517180 77 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 AP003355.3-201ENST00000623465 114 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 AC064859.1-201ENST00000624741 174 ntBASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-3Q8TAU0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-590P-201ENST00000365039 107 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 Y_RNA.565-201ENST00000384719 101 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 RNU4-69P-201ENST00000410677 143 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 AC097463.2-201ENST00000421074 142 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 AC006989.1-201ENST00000427212 131 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-3Q8TAU0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC017071.1-201ENST00000564407 2204 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 MIR30E-201ENST00000362104 92 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-633P-201ENST00000362612 103 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 Y_RNA.299-201ENST00000364973 94 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 SNORD58A-201ENST00000383875 65 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 Y_RNA.430-201ENST00000384081 110 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-679P-201ENST00000391003 106 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC006445.1-201ENST00000491925 405 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 RNA5SP341-201ENST00000516261 117 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 SNORD36C-201ENST00000516733 66 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC091544.4-201ENST00000555268 342 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 RPL12P50-201ENST00000603116 116 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC006023.1-201ENST00000603944 259 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC022217.4-201ENST00000604389 163 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 MIR7106-201ENST00000612419 65 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 AC091932.4-201ENST00000623386 200 ntBASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-3Q8TAU0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 MIR126-201ENST00000362291 85 ntBASIC4□□□□□ -1.77
NKX2-3Q8TAU0 RNA5SP126-201ENST00000365092 109 ntBASIC4□□□□□ -1.77
NKX2-3Q8TAU0 Y_RNA.467-201ENST00000384297 102 ntBASIC4□□□□□ -1.77
NKX2-3Q8TAU0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 RN7SKP111-201ENST00000410349 271 ntBASIC4□□□□□ -1.77
NKX2-3Q8TAU0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 NDUFB9P3-201ENST00000521269 501 ntBASIC4□□□□□ -1.77
NKX2-3Q8TAU0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NKX2-3Q8TAU0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 GABRG2-229ENST00000641017 3628 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-743P-201ENST00000364151 106 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-1229P-201ENST00000364295 107 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-438P-201ENST00000365561 103 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-1201P-201ENST00000384227 107 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 MIR522-201ENST00000385071 87 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 MIR802-201ENST00000390235 94 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AL445646.1-201ENST00000431784 216 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC025750.2-201ENST00000442609 450 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC233266.1-201ENST00000454518 96 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RNU7-25P-201ENST00000516544 62 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC004812.1-201ENST00000540773 146 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC078899.2-201ENST00000595282 212 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC242852.1-201ENST00000612151 96 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 uc_338.32-201ENST00000615087 172 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 MIR6715A-201ENST00000615929 79 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AC244015.1-201ENST00000622301 99 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms