Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNU6-451P-201ENST00000362921 107 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 MIR522-201ENST00000385071 87 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 AC105313.1-201ENST00000509121 353 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 SNORD45.4-201ENST00000516629 73 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 MIR3611-201ENST00000584484 83 ntBASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC148Q8NFR7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 RNU6-332P-201ENST00000391193 108 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 RNU2-66P-201ENST00000410650 161 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 AC005534.2-201ENST00000431047 433 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 MIR2115-201ENST00000516657 100 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 RNU1-54P-201ENST00000517181 120 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 AL355073.2-201ENST00000612106 557 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 MIR4251-201ENST00000635819 61 ntBASIC0.25□□□□□ -2.37
CCDC148Q8NFR7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 RNU6-879P-201ENST00000364328 108 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 RNU6-654P-201ENST00000364373 107 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 SNORA2B-201ENST00000384583 137 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 MIR489-201ENST00000384923 84 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 SNORD5.1-201ENST00000458800 75 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 AC245008.1-201ENST00000608123 476 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 AC091925.1-201ENST00000623204 462 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 AC008133.2-201ENST00000624540 351 ntBASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.24□□□□□ -2.37
CCDC148Q8NFR7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 RNY1P8-201ENST00000383970 114 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 RNU6-842P-201ENST00000384269 107 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AC116353.2-201ENST00000505332 712 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 SNORA40.9-201ENST00000515895 93 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 RNU6-1337P-201ENST00000516525 95 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 Y_RNA.704-201ENST00000516851 102 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AC063944.3-201ENST00000609969 533 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 AC015726.2-201ENST00000620112 122 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 MIR1321-201ENST00000637766 79 ntBASIC0.23□□□□□ -2.37
CCDC148Q8NFR7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 Y_RNA.557-201ENST00000384680 107 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 RNU6-700P-201ENST00000391043 107 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 RNU6-373P-201ENST00000411247 98 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 USP9YP30-201ENST00000430729 455 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 AC010486.3-201ENST00000511602 785 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 RNU6-864P-201ENST00000516256 108 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 AC105029.1-201ENST00000520250 669 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 MIR3942-201ENST00000585264 109 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 Z99129.1-201ENST00000612510 255 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
CCDC148Q8NFR7 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 RNU6-780P-201ENST00000391030 104 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 MTND1P26-201ENST00000440488 538 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 MTND1P17-201ENST00000448961 204 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 RN7SL793P-201ENST00000583259 296 ntBASIC0.21□□□□□ -2.38
CCDC148Q8NFR7 RNY1P16-201ENST00000363063 111 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 RNU6-1059P-201ENST00000363752 98 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 SNORD115-30-201ENST00000364117 82 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 AL390729.2-201ENST00000416137 156 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 AC092989.1-201ENST00000481235 277 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 RNU2-12P-201ENST00000517216 168 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 AL355375.2-201ENST00000574825 175 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CCDC148Q8NFR7 Y_RNA.38-201ENST00000362617 102 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 Y_RNA.48-201ENST00000362710 103 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 RNU6-1013P-201ENST00000384180 107 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 RNU2-70P-201ENST00000410718 179 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 RNU7-87P-201ENST00000459343 62 ntBASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC148Q8NFR7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 RNU6-396P-201ENST00000365369 105 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 RNU6-318P-201ENST00000384283 103 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 RNU6-131P-201ENST00000391144 107 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 MLLT10P1-201ENST00000418346 262 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 AC005014.2-201ENST00000607795 599 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
CCDC148Q8NFR7 MIR377-201ENST00000362145 69 ntBASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 RNU6-369P-201ENST00000362515 102 ntBASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 MT-TN-201ENST00000387400 73 ntBASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 MTND4LP16-201ENST00000440828 295 ntBASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.17□□□□□ -2.38
CCDC148Q8NFR7 SNORA25.10-201ENST00000515926 124 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms