Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-1041P-201ENST00000516254 102 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.11□□□□□ -1.91
USP48Q86UV5 MIR3126-201ENST00000577443 74 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 AP003357.1-201ENST00000604497 148 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 Y_RNA.802-201ENST00000614892 130 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 MIR3658-201ENST00000636291 56 ntBASIC3.11□□□□□ -1.91
USP48Q86UV5 AC100821.1-201ENST00000523153 2479 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 RNU6-103P-201ENST00000363686 107 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 Y_RNA.343-201ENST00000365354 112 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 RNU6-1081P-201ENST00000384537 107 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 MIR526A2-201ENST00000390198 65 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 RNA5SP210-201ENST00000391034 120 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 ATP5J2P3-201ENST00000451550 258 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.1□□□□□ -1.91
USP48Q86UV5 AC109810.1-201ENST00000534066 224 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 AC007229.1-201ENST00000590455 412 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 POLR3GP1-201ENST00000594073 261 ntBASIC3.1□□□□□ -1.91
USP48Q86UV5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
USP48Q86UV5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USP48Q86UV5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP48Q86UV5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP48Q86UV5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP48Q86UV5 RNU1-148P-201ENST00000384472 162 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 RNU6-376P-201ENST00000384731 106 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR27B-201ENST00000385129 97 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR29C-201ENST00000385231 88 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR616-201ENST00000385293 97 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 RNU6-482P-201ENST00000391068 107 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR1278-201ENST00000408753 81 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 RNA5SP511-201ENST00000410487 115 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.09□□□□□ -1.91
USP48Q86UV5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.09□□□□□ -1.91
USP48Q86UV5 AC245047.8-201ENST00000456455 284 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.09□□□□□ -1.91
USP48Q86UV5 AC015720.1-201ENST00000565251 277 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 AL365222.1-201ENST00000614661 98 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 U4.3-201ENST00000621047 82 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 MIR338-201ENST00000636369 67 ntBASIC3.09□□□□□ -1.91
USP48Q86UV5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.08□□□□□ -1.92
USP48Q86UV5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USP48Q86UV5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
USP48Q86UV5 RNU6-1290P-201ENST00000362957 109 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 Y_RNA.229-201ENST00000364347 113 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.08□□□□□ -1.92
USP48Q86UV5 RNU11-5P-201ENST00000391216 129 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 SNORA36B-201ENST00000410438 131 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 Y_RNA.676-201ENST00000516393 96 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 AC127455.1-201ENST00000565496 145 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 MIR5688-201ENST00000580619 83 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 MIR4635-201ENST00000583759 79 ntBASIC3.08□□□□□ -1.92
USP48Q86UV5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
USP48Q86UV5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USP48Q86UV5 MIR367-201ENST00000362299 68 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNA5SP493-201ENST00000364115 91 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU1-96P-201ENST00000364163 162 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 SNORA22C-201ENST00000384614 134 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU6-1186P-201ENST00000410429 97 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU2-51P-201ENST00000410708 197 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU6-383P-201ENST00000410864 94 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 HMGN2P3-201ENST00000433603 273 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RPS15AP28-201ENST00000435088 386 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 HMGN2P5-201ENST00000436882 273 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU6-479P-201ENST00000516348 105 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 RNU6-548P-201ENST00000517083 115 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 MIR548X2-201ENST00000579776 100 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 AC091895.1-201ENST00000624494 256 ntBASIC3.07□□□□□ -1.92
USP48Q86UV5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.06□□□□□ -1.92
USP48Q86UV5 SNORD115-3-201ENST00000363100 82 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 RNU6-23P-201ENST00000363283 107 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 RNU6-1164P-201ENST00000364428 107 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 RNU6-1168P-201ENST00000390831 104 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.06□□□□□ -1.92
USP48Q86UV5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.06□□□□□ -1.92
USP48Q86UV5 MIR4724-201ENST00000579485 89 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 MIR4658-201ENST00000584344 65 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 AL359075.3-201ENST00000613288 217 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 AP006437.1-201ENST00000641440 3685 ntBASIC3.06□□□□□ -1.92
USP48Q86UV5 RNY1P11-201ENST00000363759 113 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU4-11P-201ENST00000365287 132 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU6-136P-201ENST00000384663 107 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 MIR515-2-201ENST00000384883 83 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 MIR515-1-201ENST00000384884 83 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 AC007064.1-201ENST00000412238 351 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.05□□□□□ -1.92
USP48Q86UV5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU7-197P-201ENST00000458836 62 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RPL23AP54-201ENST00000495129 419 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU7-99P-201ENST00000516271 62 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 RNU6-1007P-201ENST00000516586 107 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 MIR3169-201ENST00000578032 83 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 DNAJC19P2-201ENST00000593340 302 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 AL031274.2-201ENST00000599419 203 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 AL391903.3-201ENST00000612158 163 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 AC022202.1-201ENST00000613515 211 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms