Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC103810.6-201ENST00000606708 136 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
DDX53Q86TM3 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 MIR520G-201ENST00000385064 90 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 PCNPP3-201ENST00000393579 471 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 AC074198.2-201ENST00000508153 258 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 RN7SKP164-201ENST00000516138 266 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 AC024995.1-201ENST00000523014 93 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.58□□□□□ -2
DDX53Q86TM3 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 MIR6079-201ENST00000635807 62 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
DDX53Q86TM3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX53Q86TM3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX53Q86TM3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
DDX53Q86TM3 AC018630.2-201ENST00000534866 2403 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 RNU1-52P-201ENST00000384190 164 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.57□□□□□ -2
DDX53Q86TM3 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.57□□□□□ -2
DDX53Q86TM3 AC233266.1-201ENST00000454518 96 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AC245047.8-201ENST00000456455 284 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 snoU13.23-201ENST00000458863 104 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 RPS26P45-201ENST00000471748 340 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.57□□□□□ -2
DDX53Q86TM3 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 RNA5SP281-201ENST00000516504 135 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 RNU6-453P-201ENST00000516819 85 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 MIR1273D-201ENST00000577266 86 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AC091178.2-201ENST00000584401 117 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AC242852.1-201ENST00000612151 96 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 AC244015.1-201ENST00000622301 99 ntBASIC2.57□□□□□ -2
DDX53Q86TM3 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 AC100821.1-201ENST00000523153 2479 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 RNU6-674P-201ENST00000363831 107 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 RNU11-5P-201ENST00000391216 129 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 MIR1278-201ENST00000408753 81 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 SCARNA8-201ENST00000515924 131 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 MIR5688-201ENST00000580619 83 ntBASIC2.56□□□□□ -2
DDX53Q86TM3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 RNU4-41P-201ENST00000364426 143 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 RNA5SP465-201ENST00000391195 109 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
DDX53Q86TM3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 MIR5094-201ENST00000578766 85 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 U6.106-201ENST00000636360 105 ntBASIC2.55□□□□□ -2
DDX53Q86TM3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
DDX53Q86TM3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 MIR616-201ENST00000385293 97 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 MT-TT-201ENST00000387460 66 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 RNU6-341P-201ENST00000516973 96 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 AC069114.2-201ENST00000604699 304 ntBASIC2.54□□□□□ -2
DDX53Q86TM3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.54□□□□□ -2
DDX53Q86TM3 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 RNU6-103P-201ENST00000363686 107 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX53Q86TM3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
DDX53Q86TM3 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 DEFB122-202ENST00000569013 197 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 MIR4744-201ENST00000581563 82 ntBASIC2.53□□□□□ -2
DDX53Q86TM3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
DDX53Q86TM3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX53Q86TM3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX53Q86TM3 AL603825.1-201ENST00000438481 80 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 AL606517.2-201ENST00000442855 241 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 RNU7-94P-201ENST00000459576 63 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 RNVU1-2-201ENST00000516326 135 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX53Q86TM3 AC084364.2-201ENST00000546924 395 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 AC015712.3-201ENST00000559380 164 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 AL391903.3-201ENST00000612158 163 ntBASIC2.52□□□□□ -2.01
DDX53Q86TM3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
DDX53Q86TM3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX53Q86TM3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 RNU6-578P-201ENST00000390980 103 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms