Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 SNORD5.1-201ENST00000458800 75 ntBASIC0.31□□□□□ -2.36
SSX9Q7RTT3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.31□□□□□ -2.36
SSX9Q7RTT3 RNU6-864P-201ENST00000516256 108 ntBASIC0.31□□□□□ -2.36
SSX9Q7RTT3 AC012433.1-201ENST00000588916 398 ntBASIC0.31□□□□□ -2.36
SSX9Q7RTT3 MIR6515-201ENST00000619843 57 ntBASIC0.31□□□□□ -2.36
SSX9Q7RTT3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SSX9Q7RTT3 RNU6-874P-201ENST00000362390 105 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 RNU6-1310P-201ENST00000384153 107 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 MIR522-201ENST00000385071 87 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 MIR1302-7-201ENST00000408841 72 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.3□□□□□ -2.36
SSX9Q7RTT3 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 RNU6-566P-201ENST00000516790 107 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 AC022709.1-201ENST00000615967 87 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.3□□□□□ -2.36
SSX9Q7RTT3 MIR4251-201ENST00000635819 61 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 MIR3662-201ENST00000637030 95 ntBASIC0.3□□□□□ -2.36
SSX9Q7RTT3 RNU6-1090P-201ENST00000364065 94 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 MTND1P4-201ENST00000435196 415 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.29□□□□□ -2.36
SSX9Q7RTT3 MTND1P1-201ENST00000445453 368 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.29□□□□□ -2.36
SSX9Q7RTT3 RNU6-496P-201ENST00000516145 99 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AC005014.2-201ENST00000607795 599 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 AC008133.2-201ENST00000624540 351 ntBASIC0.29□□□□□ -2.36
SSX9Q7RTT3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SSX9Q7RTT3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 RNU6-1013P-201ENST00000384180 107 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 RNU6-318P-201ENST00000384283 103 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 RNU6-373P-201ENST00000411247 98 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.28□□□□□ -2.36
SSX9Q7RTT3 MTND4LP16-201ENST00000440828 295 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 MTND1P17-201ENST00000448961 204 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.28□□□□□ -2.36
SSX9Q7RTT3 SNORA25.10-201ENST00000515926 124 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 Y_RNA.688-201ENST00000516565 95 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AC105029.1-201ENST00000520250 669 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AC104695.3-201ENST00000604052 296 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 AL355073.2-201ENST00000612106 557 ntBASIC0.28□□□□□ -2.36
SSX9Q7RTT3 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 SNORD115-30-201ENST00000364117 82 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 MIR936-201ENST00000401264 98 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 AC105313.1-201ENST00000509121 353 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 RNU6-314P-201ENST00000516574 104 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 AC245008.1-201ENST00000608123 476 ntBASIC0.27□□□□□ -2.37
SSX9Q7RTT3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.27□□□□□ -2.37
SSX9Q7RTT3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.2-201ENST00000362330 96 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 RNU6-831P-201ENST00000384548 107 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 MIR598-201ENST00000384868 97 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 SNORD12B-201ENST00000410433 91 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 AL353997.1-201ENST00000432936 108 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 HMGN2P32-201ENST00000444648 269 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.26□□□□□ -2.37
SSX9Q7RTT3 RNU2-12P-201ENST00000517216 168 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 SNORD50B-201ENST00000364995 70 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 MIR573-201ENST00000384964 99 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 RNU6-131P-201ENST00000391144 107 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 RNU6-1148P-201ENST00000410992 104 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 RNU6-329P-201ENST00000459618 107 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 RNU6-408P-201ENST00000515910 100 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 MIR4790-201ENST00000577799 79 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 MIR548AR-201ENST00000582191 57 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 AC004467.1-201ENST00000615678 330 ntBASIC0.25□□□□□ -2.37
SSX9Q7RTT3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.25□□□□□ -2.37
SSX9Q7RTT3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SSX9Q7RTT3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 RNY1-201ENST00000364228 113 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 RNU6-342P-201ENST00000384521 104 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 SNORD28B-201ENST00000390993 75 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 RNU2-16P-201ENST00000410712 136 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 AC009161.1-201ENST00000417306 376 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 AL139396.1-201ENST00000421137 167 ntBASIC0.24□□□□□ -2.37
SSX9Q7RTT3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms