Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 MTND1P29-201ENST00000448112 647 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-625P-201ENST00000459412 107 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 SNORA40.9-201ENST00000515895 93 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 SNORA25.10-201ENST00000515926 124 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-566P-201ENST00000516790 107 ntBASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.3□□□□□ -2.36
NIPAL1Q6NVV3 RNA5SP48-201ENST00000363969 126 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 MIR136-201ENST00000385207 82 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 AC026782.1-201ENST00000512952 449 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 RNU7-43P-201ENST00000516554 64 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 RNU2-12P-201ENST00000517216 168 ntBASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.29□□□□□ -2.36
NIPAL1Q6NVV3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 SNORD14.1-201ENST00000365609 90 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 RNU6-373P-201ENST00000411247 98 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 MTND3P21-201ENST00000433774 331 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 MTND4LP16-201ENST00000440828 295 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 RNU1-54P-201ENST00000517181 120 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 AC109635.3-201ENST00000529536 185 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 AC011195.1-201ENST00000578177 177 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 MIR6128-201ENST00000615528 109 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.28□□□□□ -2.36
NIPAL1Q6NVV3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-369P-201ENST00000362515 102 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 SNORD113.3-201ENST00000364630 78 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 MIR15B-201ENST00000385045 98 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNA5SP475-201ENST00000410568 110 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 SNORD123-201ENST00000459473 70 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 SNORA18.7-201ENST00000516910 131 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-273P-201ENST00000516937 96 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 AC055872.1-201ENST00000570978 278 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 AC018462.2-201ENST00000605375 395 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 AC010487.4-201ENST00000637027 61 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 MIR3662-201ENST00000637030 95 ntBASIC0.27□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-879P-201ENST00000364328 108 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 SNORA36.2-201ENST00000384004 127 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 MTND1P4-201ENST00000435196 415 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 RPS29P25-201ENST00000481709 171 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 MTND5P5-201ENST00000503764 376 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 AC105313.1-201ENST00000509121 353 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-506P-201ENST00000516553 94 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 SNORD45.4-201ENST00000516629 73 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 AC018638.8-201ENST00000588755 281 ntBASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
NIPAL1Q6NVV3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-613P-201ENST00000410412 108 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 RNA5SP436-201ENST00000516020 115 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 MTND2P38-201ENST00000522536 667 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.25□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNY4P14-201ENST00000363656 96 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 SNORD50B-201ENST00000364995 70 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-1310P-201ENST00000384153 107 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 MIR613-201ENST00000385248 95 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-700P-201ENST00000391043 107 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 AL390729.2-201ENST00000416137 156 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNU7-87P-201ENST00000459343 62 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 RNU6-329P-201ENST00000459618 107 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 AC011352.1-201ENST00000512300 793 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 AC060780.3-201ENST00000589464 80 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 AC104695.3-201ENST00000604052 296 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.24□□□□□ -2.37
NIPAL1Q6NVV3 AC008133.2-201ENST00000624540 351 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms