Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MTATP6P14-201ENST00000455189 673 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 SNORD2-201ENST00000459163 69 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 MIR466-201ENST00000580653 84 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 AL445584.3-201ENST00000617173 78 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 AC114491.1-201ENST00000416095 246 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 MTCO2P5-201ENST00000422621 426 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 SUMO1P1-201ENST00000497904 306 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 MTATP6P2-201ENST00000603319 678 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 AC087683.2-201ENST00000611384 326 ntBASIC-0.95□□□□□ -2.56
VPS13DQ5THJ4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-543P-201ENST00000362576 108 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-114P-201ENST00000384704 105 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 BNIP3P40-201ENST00000596017 556 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AC253576.2-201ENST00000618815 580 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RPL30P15-201ENST00000457129 321 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-765P-201ENST00000516916 99 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AC090615.1-201ENST00000577519 154 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Z97988.1-201ENST00000637697 135 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 SNORD38B-201ENST00000384690 67 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNY4-201ENST00000516507 96 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU7-188P-201ENST00000517063 64 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AC068587.5-201ENST00000528506 175 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AL355375.2-201ENST00000574825 175 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 U6.73-201ENST00000619194 103 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 MIR181B2-201ENST00000385004 89 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AL139421.1-201ENST00000423010 169 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNA5SP484-201ENST00000458857 111 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 AC008608.1-201ENST00000603910 127 ntBASIC-0.96□□□□□ -2.56
VPS13DQ5THJ4 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 MIR518F-201ENST00000384973 87 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 MIR889-201ENST00000401280 79 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 RNU2-9P-201ENST00000410194 145 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 snoU13.13-201ENST00000458842 104 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 SERF1AP1-201ENST00000514575 187 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 MIR544B-201ENST00000582372 78 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 AC011373.1-201ENST00000607270 237 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 MIR8066-201ENST00000617280 78 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 RNU6-293P-201ENST00000411259 106 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 SNRPGP10-201ENST00000432323 225 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 USP9YP12-201ENST00000450481 570 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 AC008628.2-201ENST00000502605 298 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 AL049777.1-201ENST00000622740 518 ntBASIC-0.97□□□□□ -2.56
VPS13DQ5THJ4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 RPS29P13-201ENST00000402041 169 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 RNU7-182P-201ENST00000459009 62 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 RNU6-118P-201ENST00000516552 102 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 MTND1P36-201ENST00000522384 936 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 BNIP3P39-201ENST00000601077 554 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 AP000907.4-201ENST00000604143 237 ntBASIC-0.97□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RNU7-67P-201ENST00000459003 62 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 SNORD116-30-201ENST00000516468 85 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 MIR3684-201ENST00000579779 74 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 MIR548AR-201ENST00000582191 57 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC091948.2-201ENST00000636510 279 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RNU6-125P-201ENST00000384505 107 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RPL23AP30-201ENST00000432419 501 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 snoU13.16-201ENST00000459350 104 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC087883.1-201ENST00000551882 391 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC073648.5-201ENST00000603502 305 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AP002371.2-201ENST00000624450 503 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RNU6-228P-201ENST00000362700 106 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 SNRPGP14-201ENST00000435400 219 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC010655.3-201ENST00000478818 450 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC005178.1-201ENST00000508392 440 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 AC104073.3-201ENST00000610942 955 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 RMST_7.1-201ENST00000621935 268 ntBASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.98□□□□□ -2.57
VPS13DQ5THJ4 U4.7-201ENST00000638126 106 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms