Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 RNY1P5-201ENST00000383890 115 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 SNORA72.4-201ENST00000384174 132 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 SNORA40.19-201ENST00000390846 128 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 SEPT7P4-201ENST00000437076 306 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 HMGN2P34-201ENST00000437647 269 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC245102.2-201ENST00000448956 180 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 RPS20P10-201ENST00000451209 253 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC108706.1-201ENST00000611053 297 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 U2.20-201ENST00000613956 192 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AL078604.3-201ENST00000615580 211 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 AC132825.6-201ENST00000638861 357 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU6-818P-201ENST00000364837 108 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU6-407P-201ENST00000365280 104 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 SNORD116-18-201ENST00000383961 92 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU6-417P-201ENST00000384712 107 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 MIR1283-2-201ENST00000408621 87 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU6-710P-201ENST00000410424 105 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU1-131P-201ENST00000458943 161 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 RNU7-141P-201ENST00000459304 62 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
SLC44A4Q53GD3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 RNU1-58P-201ENST00000362413 163 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 SNORA33-201ENST00000363664 130 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 RNU6-704P-201ENST00000364162 103 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 MIR613-201ENST00000385248 95 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 RNU6-381P-201ENST00000391259 108 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 MIR1253-201ENST00000408273 105 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 RNU6-453P-201ENST00000516819 85 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A4Q53GD3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 MIR21-201ENST00000362134 72 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 SNORA27.1-201ENST00000362604 124 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 RNU6-899P-201ENST00000363947 107 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 RNU6-312P-201ENST00000364629 107 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 MIR626-201ENST00000385032 94 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 MIR29C-201ENST00000385231 88 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 HMGN2P23-201ENST00000456759 269 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 RPL23AP42-201ENST00000471152 471 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 AC010598.1-201ENST00000510378 103 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 SCARNA8-201ENST00000515924 131 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SLC44A4Q53GD3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 SNORA8.3-201ENST00000384679 139 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 AC117454.1-201ENST00000491120 168 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 RNA5SP458-201ENST00000516188 119 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 MIR338-201ENST00000636369 67 ntBASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC44A4Q53GD3 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU6-862P-201ENST00000362804 105 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU4-84P-201ENST00000364200 139 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 U8.7-201ENST00000364940 136 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU6-969P-201ENST00000383900 105 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU4-52P-201ENST00000384209 138 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms