Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AL049830.1-201ENST00000468034 425 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 RN7SKP164-201ENST00000516138 266 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 RNA5SP24-201ENST00000516478 95 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 AC072026.1-201ENST00000605023 201 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 RNU2-4P-201ENST00000606190 192 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 AC098479.1-201ENST00000609225 154 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 AC064859.1-201ENST00000624741 174 ntBASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.270-201ENST00000364693 104 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 MTND2P29-201ENST00000438595 412 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 RNU7-120P-201ENST00000459334 63 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 RNU2-19P-201ENST00000517288 84 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 AC022559.1-201ENST00000520905 205 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 AL358944.1-201ENST00000528537 144 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 AC010297.1-201ENST00000623948 149 ntBASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
FNDC3BQ53EP0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 SNORA1B-201ENST00000362535 133 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 MIR520A-201ENST00000384862 85 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 RNU6-381P-201ENST00000391259 108 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 AL359511.1-201ENST00000402970 211 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 AC245047.8-201ENST00000456455 284 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 AC234781.5-201ENST00000508429 271 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 RPL23AP91-201ENST00000569211 455 ntBASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.5□□□□□ -2.01
FNDC3BQ53EP0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNU4-53P-201ENST00000410828 140 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 AL606517.2-201ENST00000442855 241 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNA5SP57-201ENST00000459463 123 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 AC055731.1-201ENST00000474387 401 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RPS27AP9-201ENST00000477681 438 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNU6-826P-201ENST00000516827 104 ntBASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
FNDC3BQ53EP0 RNU6-103P-201ENST00000363686 107 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 RNA5SP496-201ENST00000391240 109 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 MLLT10P1-201ENST00000418346 262 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 UBL5P3-201ENST00000475112 231 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 HMGN1P7-201ENST00000491722 313 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 SUB1P4-201ENST00000566062 339 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
FNDC3BQ53EP0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 RNU6-950P-201ENST00000384651 107 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 MIR616-201ENST00000385293 97 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 RNU6-440P-201ENST00000390882 105 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 RNU6-861P-201ENST00000516745 106 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 MIR4744-201ENST00000581563 82 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 MIR8054-201ENST00000620877 86 ntBASIC2.47□□□□□ -2.01
FNDC3BQ53EP0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 RNA5SP276-201ENST00000362580 94 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 U8.2-201ENST00000363156 134 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 RNU6-112P-201ENST00000363599 104 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 MT-TT-201ENST00000387460 66 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 SNRPGP10-201ENST00000432323 225 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 RPS27P1-201ENST00000450552 247 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 RNU6-453P-201ENST00000516819 85 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 FTX_2.1-201ENST00000618816 94 ntBASIC2.46□□□□□ -2.02
FNDC3BQ53EP0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms