Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.26□□□□□ -2.05
KHDC1Q4VXA5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KHDC1Q4VXA5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.308-201ENST00000365043 101 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 AC245047.4-201ENST00000433189 144 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 RNU6-437P-201ENST00000459408 95 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 RNY3P16-201ENST00000516338 101 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 RNU6-182P-201ENST00000516970 105 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 MIR4724-201ENST00000579485 89 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
KHDC1Q4VXA5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.793-201ENST00000411222 111 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 Z98949.2-201ENST00000440996 144 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 TRBV12-1-201ENST00000479785 344 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 MIR4435-1-201ENST00000582552 80 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
KHDC1Q4VXA5 RNU6-1020P-201ENST00000363684 107 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 RNU4-10P-201ENST00000364383 140 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 RNA5SP508-201ENST00000411327 119 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 Z98742.3-201ENST00000418637 326 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC233266.1-201ENST00000454518 96 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AL929325.1-201ENST00000603096 117 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC022217.4-201ENST00000604389 163 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC242852.1-201ENST00000612151 96 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC004792.1-201ENST00000614523 137 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC244015.1-201ENST00000622301 99 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 AC064859.1-201ENST00000624741 174 ntBASIC2.23□□□□□ -2.05
KHDC1Q4VXA5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 MIR367-201ENST00000362299 68 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.24-201ENST00000362508 103 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 SNORA63D-201ENST00000364359 132 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 RNU6-923P-201ENST00000364753 107 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 RNU4-17P-201ENST00000365598 141 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 Y_RNA.435-201ENST00000384095 112 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 RNU6-918P-201ENST00000391219 106 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 RPS27P1-201ENST00000450552 247 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 MIR4308-201ENST00000580634 81 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 MIR2681-201ENST00000581814 105 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
KHDC1Q4VXA5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 RNU6-969P-201ENST00000383900 105 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 RNU6-493P-201ENST00000391321 108 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 RNU6-383P-201ENST00000410864 94 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 COX6CP10-201ENST00000416832 224 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 AP002004.2-201ENST00000531656 154 ntBASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
KHDC1Q4VXA5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNU6-112P-201ENST00000363599 104 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNU6-47P-201ENST00000383866 107 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 MIR520A-201ENST00000384862 85 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP109-201ENST00000391010 116 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP496-201ENST00000391240 109 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNU6-381P-201ENST00000391259 108 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AL512604.1-201ENST00000404812 257 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AC245047.3-201ENST00000429428 127 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AL606517.2-201ENST00000442855 241 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RNU7-120P-201ENST00000459334 63 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 RN7SKP164-201ENST00000516138 266 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AP002392.1-201ENST00000537692 208 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 AC072026.1-201ENST00000605023 201 ntBASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.7-201ENST00000362352 102 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms