Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 U7.6-201ENST00000610841 64 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 AC006441.5-201ENST00000612680 209 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 AC022306.2-201ENST00000617563 647 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 AC022960.3-201ENST00000619794 441 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 RNU4-36P-201ENST00000364294 144 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 MCFD2P1-201ENST00000417812 300 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 RPS27AP14-201ENST00000422868 454 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 AC091179.3-201ENST00000474761 144 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 AC091144.1-201ENST00000519573 138 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 MIR3684-201ENST00000579779 74 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 MIR7111-201ENST00000619751 72 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 AC093726.3-201ENST00000637588 150 ntBASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.39□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 RNU6-47P-201ENST00000383866 107 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 RNU6-533P-201ENST00000384144 107 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 SNORD28-201ENST00000384706 75 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 MIR522-201ENST00000385071 87 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 MTND1P14-201ENST00000427400 950 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 U8.21-201ENST00000459536 136 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 MIR548AX-201ENST00000580117 73 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 MIR6740-201ENST00000618268 113 ntBASIC-1.4□□□□□ -2.63
CCDC58Q4VC31 U8.6-201ENST00000364939 135 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 AC021146.6-201ENST00000514659 117 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 MIR4639-201ENST00000584938 69 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 Z94722.1-201ENST00000604328 474 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 AL163152.1-201ENST00000642001 374 ntBASIC-1.41□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 MTND3P1-201ENST00000441336 220 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 AL500527.2-201ENST00000454105 95 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 snoU13.16-201ENST00000459350 104 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 MIR4791-201ENST00000607666 84 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.42□□□□□ -2.64
CCDC58Q4VC31 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 SNORD114-25-201ENST00000363742 72 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 RNU6-136P-201ENST00000384663 107 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 SNORD73A-201ENST00000386062 65 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 MTCYBP4-201ENST00000401524 249 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 RPL23AP75-201ENST00000491601 451 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 AC104010.1-201ENST00000616889 150 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 AC126544.2-201ENST00000625174 749 ntBASIC-1.43□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 SNORA20.2-201ENST00000383922 131 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 MIR518F-201ENST00000384973 87 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 RNU6-329P-201ENST00000459618 107 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 SCARNA1-201ENST00000517138 166 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 MIR4775-201ENST00000581168 75 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 MIR4499-201ENST00000584834 69 ntBASIC-1.44□□□□□ -2.64
CCDC58Q4VC31 SNORD114-15-201ENST00000364687 72 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 RNU6-35P-201ENST00000384530 107 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC090844.1-201ENST00000422019 156 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC010486.3-201ENST00000511602 785 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC105029.1-201ENST00000520250 669 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AL355297.3-201ENST00000604082 446 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC080013.3-201ENST00000606839 578 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AP001330.5-201ENST00000607176 411 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 uc_338.19-201ENST00000616808 99 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 AC105081.1-201ENST00000617727 106 ntBASIC-1.45□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 RNU6-274P-201ENST00000459566 107 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 SNORA31.14-201ENST00000516728 116 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 AC084368.1-201ENST00000620935 65 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 AC244669.1-204ENST00000621564 178 ntBASIC-1.46□□□□□ -2.64
CCDC58Q4VC31 RNU6-169P-201ENST00000365336 107 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 SNORD38C-201ENST00000384381 69 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms