Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC006600.1-201ENST00000572529 153 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.804-201ENST00000615262 101 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 AC068647.2-201ENST00000637380 353 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 SNORD115-30-201ENST00000364117 82 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-117P-201ENST00000365415 107 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNY3P14-201ENST00000384309 102 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-505P-201ENST00000384427 107 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 MIR7-2-201ENST00000384970 110 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1009P-201ENST00000390996 107 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 MTCO2P27-201ENST00000420740 428 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 MTND5P20-201ENST00000448677 143 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-341P-201ENST00000516973 96 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 RNU2-12P-201ENST00000517216 168 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 AC005176.2-201ENST00000596933 147 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 U6.92-201ENST00000636464 89 ntBASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
SHROOM1Q2M3G4 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNY3P4-201ENST00000384428 101 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 MIR660-201ENST00000385235 97 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 SNORD78.2-201ENST00000391076 69 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC099799.1-201ENST00000439809 192 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 SNORD19B-201ENST00000459623 84 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 OR9P1P-201ENST00000496431 281 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNU7-12P-201ENST00000516030 62 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-155P-201ENST00000516347 100 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.702-201ENST00000516843 96 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 SNORD116.3-201ENST00000517176 78 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 MIR3684-201ENST00000579779 74 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC006380.1-201ENST00000603598 186 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 AC005828.6-201ENST00000606610 232 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 SNORA28-201ENST00000606769 126 ntBASIC1.17□□□□□ -2.22
SHROOM1Q2M3G4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 RNU4-76P-201ENST00000364509 141 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AL031003.1-201ENST00000404229 172 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AL354751.2-201ENST00000415471 210 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 MTND1P14-201ENST00000427400 950 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AL049830.1-201ENST00000468034 425 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AC136932.1-201ENST00000574771 208 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 MIR4795-201ENST00000584182 89 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AC092447.9-201ENST00000603395 144 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AC240442.1-201ENST00000616055 283 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SHROOM1Q2M3G4 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 RNU4-41P-201ENST00000364426 143 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 Z98949.2-201ENST00000440996 144 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 RNA5SP480-201ENST00000516840 109 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 DEFB108E-201ENST00000524692 240 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 AP002004.2-201ENST00000531656 154 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 AL162424.1-201ENST00000602325 221 ntBASIC1.15□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.263-201ENST00000364659 114 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 AC104332.1-201ENST00000440471 797 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 FGF7P4-201ENST00000509595 295 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-165P-201ENST00000517170 99 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 VN1R91P-201ENST00000594377 169 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 MIR4272-201ENST00000635924 64 ntBASIC1.14□□□□□ -2.23
SHROOM1Q2M3G4 RNU4-73P-201ENST00000363164 141 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms