Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL591926.4-201ENST00000616895 298 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 MTND4LP32-201ENST00000636111 270 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AC099654.14-201ENST00000638599 341 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.86□□□□□ -2.27
RAB40BQ12829 Y_RNA.4-201ENST00000362333 112 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 Y_RNA.446-201ENST00000384178 104 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 MIR452-201ENST00000385020 85 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 RNU2-61P-201ENST00000411069 191 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 AC138393.2-201ENST00000414742 246 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
RAB40BQ12829 AC099799.1-201ENST00000439809 192 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 CHEK2P4-201ENST00000450340 246 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
RAB40BQ12829 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 MIR4659A-201ENST00000580269 81 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 AC004832.4-201ENST00000608952 331 ntBASIC0.86□□□□□ -2.27
RAB40BQ12829 RNU6-490P-201ENST00000362985 107 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 U8.5-201ENST00000364528 136 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 Y_RNA.336-201ENST00000365307 109 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 RNU6-53P-201ENST00000365367 106 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 Y_RNA.387-201ENST00000383918 102 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 SNORA80D-201ENST00000384488 135 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 MIR559-201ENST00000385188 96 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 AC096644.2-201ENST00000429278 159 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 AC093019.1-201ENST00000443135 252 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 RNU6-911P-201ENST00000516523 104 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.85□□□□□ -2.27
RAB40BQ12829 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 AL008636.1-201ENST00000625038 1018 ntBASIC0.85□□□□□ -2.27
RAB40BQ12829 Y_RNA.142-201ENST00000363491 102 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 Y_RNA.384-201ENST00000383909 102 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 RNY4P36-201ENST00000391116 96 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 RNU6-1199P-201ENST00000411249 104 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.84□□□□□ -2.27
RAB40BQ12829 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 RNU6-699P-201ENST00000517081 110 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 AC022616.4-201ENST00000522985 181 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.84□□□□□ -2.27
RAB40BQ12829 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.84□□□□□ -2.27
RAB40BQ12829 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RAB40BQ12829 U6.92-201ENST00000636464 89 ntBASIC0.84□□□□□ -2.27
RAB40BQ12829 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
RAB40BQ12829 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RAB40BQ12829 Y_RNA.27-201ENST00000362540 103 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 Y_RNA.164-201ENST00000363709 102 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 Y_RNA.172-201ENST00000363765 102 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 Y_RNA.230-201ENST00000364348 109 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 RNU6-1040P-201ENST00000383974 107 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 RNU6-708P-201ENST00000384217 107 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 MIR1298-201ENST00000408783 112 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 RBMX2P4-201ENST00000441256 376 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.83□□□□□ -2.28
RAB40BQ12829 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
RAB40BQ12829 AC245047.8-201ENST00000456455 284 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 RNU6-436P-201ENST00000516171 114 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 MIR4762-201ENST00000585261 75 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 AC138305.3-201ENST00000624988 240 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
RAB40BQ12829 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RAB40BQ12829 Y_RNA.253-201ENST00000364562 112 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 MIR516B2-201ENST00000385190 85 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 RPS20P10-201ENST00000451209 253 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 COX6CP14-201ENST00000469580 174 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 RNU6-277P-201ENST00000516272 106 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 RNU6-966P-201ENST00000516479 104 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 AC006600.1-201ENST00000572529 153 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 VN1R91P-201ENST00000594377 169 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 AC005972.2-201ENST00000604690 348 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 AC122108.2-201ENST00000611946 526 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 AL391903.3-201ENST00000612158 163 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 MIR1302-1-201ENST00000637932 143 ntBASIC0.82□□□□□ -2.28
RAB40BQ12829 Y_RNA.146-201ENST00000363549 102 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 Y_RNA.390-201ENST00000383932 102 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 Y_RNA.428-201ENST00000384078 102 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 SNORD116-29-201ENST00000384516 83 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 AC082651.2-201ENST00000496833 166 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
RAB40BQ12829 SNORA25.10-201ENST00000515926 124 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 RN7SKP295-201ENST00000517264 153 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 AC022441.3-201ENST00000605737 136 ntBASIC0.81□□□□□ -2.28
RAB40BQ12829 RNU6-1084P-201ENST00000362498 107 ntBASIC0.8□□□□□ -2.28
RAB40BQ12829 Y_RNA.329-201ENST00000365209 107 ntBASIC0.8□□□□□ -2.28
RAB40BQ12829 SNORA72-201ENST00000384339 132 ntBASIC0.8□□□□□ -2.28
RAB40BQ12829 MIR522-201ENST00000385071 87 ntBASIC0.8□□□□□ -2.28
RAB40BQ12829 SNORA75.2-201ENST00000391138 150 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms