Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AC004832.4-201ENST00000608952 331 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.16-201ENST00000362421 102 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 SNORD116-13-201ENST00000384408 92 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ZNF543Q08ER8 snosnR66.1-201ENST00000391095 99 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 RN7SKP200-201ENST00000410564 320 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 HSPE1P21-201ENST00000438283 308 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 U8.19-201ENST00000459095 133 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 snoU13.27-201ENST00000459278 104 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 RNU6-237P-201ENST00000515985 71 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 RNU7-116P-201ENST00000516940 62 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 DEFB108E-201ENST00000524692 240 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 AP002004.2-201ENST00000531656 154 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 AC091178.2-201ENST00000584401 117 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.07□□□□□ -2.08
ZNF543Q08ER8 AL162424.1-201ENST00000602325 221 ntBASIC2.07□□□□□ -2.08
ZNF543Q08ER8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZNF543Q08ER8 MIR335-201ENST00000362173 94 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.288-201ENST00000364854 92 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 RNU2-56P-201ENST00000516826 190 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 SCARNA24.2-201ENST00000516968 130 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 SNORA28-201ENST00000606769 126 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 AC068647.2-201ENST00000637380 353 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
ZNF543Q08ER8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.06□□□□□ -2.08
ZNF543Q08ER8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ZNF543Q08ER8 RNU6-661P-201ENST00000362409 107 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 RNU6-414P-201ENST00000363705 104 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 RNA5SP99-201ENST00000364020 114 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 RNU6-440P-201ENST00000390882 105 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AL627390.1-201ENST00000396055 340 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AC233266.1-201ENST00000454518 96 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AC091959.1-201ENST00000495857 238 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
ZNF543Q08ER8 SNORA27.4-201ENST00000516650 95 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AC242852.1-201ENST00000612151 96 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AP001282.2-201ENST00000616149 309 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 AC244015.1-201ENST00000622301 99 ntBASIC2.05□□□□□ -2.08
ZNF543Q08ER8 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.05□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.237-201ENST00000364439 102 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 RNU6-196P-201ENST00000384315 107 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.483-201ENST00000384380 101 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 MT-TW-201ENST00000387382 68 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 RPS4XP11-201ENST00000446897 772 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF543Q08ER8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ZNF543Q08ER8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 SNORA44.1-201ENST00000517031 108 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF543Q08ER8 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.04□□□□□ -2.08
ZNF543Q08ER8 U4.1-201ENST00000620349 87 ntBASIC2.04□□□□□ -2.08
ZNF543Q08ER8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.04□□□□□ -2.08
ZNF543Q08ER8 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 SNORA72-201ENST00000384339 132 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.518-201ENST00000384552 113 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ZNF543Q08ER8 RNU6-482P-201ENST00000391068 107 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 RNU7-34P-201ENST00000459394 64 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 AC011604.1-201ENST00000545978 196 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 POLR3GP1-201ENST00000594073 261 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 AL078604.3-201ENST00000615580 211 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 AC100821.1-201ENST00000523153 2479 ntBASIC2.03□□□□□ -2.08
ZNF543Q08ER8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZNF543Q08ER8 SNORA4.2-201ENST00000365313 147 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 Y_RNA.396-201ENST00000383949 103 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 SNORA72.4-201ENST00000384174 132 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 RNU6-472P-201ENST00000384299 107 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 MIR568-201ENST00000385036 95 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.02□□□□□ -2.09
ZNF543Q08ER8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.02□□□□□ -2.09
ZNF543Q08ER8 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
ZNF543Q08ER8 7SK.10-201ENST00000621414 298 ntBASIC2.02□□□□□ -2.09
ZNF543Q08ER8 UBE2WP1-201ENST00000362030 340 ntBASIC2.01□□□□□ -2.09
ZNF543Q08ER8 SNORA1B-201ENST00000362535 133 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms