Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Z92545.1-201ENST00000411782 234 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 RNU7-94P-201ENST00000459576 63 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 IGKV1-22-201ENST00000524313 326 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 AP002004.2-201ENST00000531656 154 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 AC022217.4-201ENST00000604389 163 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH1Q08174 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDH1Q08174 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDH1Q08174 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDH1Q08174 Y_RNA.43-201ENST00000362670 111 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 RNU6-160P-201ENST00000384591 107 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 MIR515-2-201ENST00000384883 83 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 MIR515-1-201ENST00000384884 83 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 MIR548A2-201ENST00000384956 97 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 SNORD77.3-201ENST00000391113 65 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 FTH1P12-201ENST00000432137 551 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 AL049830.1-201ENST00000468034 425 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDH1Q08174 RNU6-1149P-201ENST00000516810 97 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 RNA5SP170-201ENST00000517150 101 ntBASIC3.04□□□□□ -1.92
PCDH1Q08174 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCDH1Q08174 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDH1Q08174 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
PCDH1Q08174 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDH1Q08174 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDH1Q08174 SNORA38.1-201ENST00000364172 131 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 MIR522-201ENST00000385071 87 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 MIR1263-201ENST00000408324 86 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 RNU6-113P-201ENST00000516653 101 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 AC024995.1-201ENST00000523014 93 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 AC091544.4-201ENST00000555268 342 ntBASIC3.03□□□□□ -1.92
PCDH1Q08174 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PCDH1Q08174 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDH1Q08174 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
PCDH1Q08174 AC008555.8-201ENST00000623602 2168 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH1Q08174 RNU6-1072P-201ENST00000384703 107 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 RNU6-443P-201ENST00000384780 107 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 MIR518F-201ENST00000384973 87 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 MIR634-201ENST00000385208 97 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 MIR802-201ENST00000390235 94 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
PCDH1Q08174 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDH1Q08174 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDH1Q08174 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH1Q08174 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH1Q08174 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PCDH1Q08174 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDH1Q08174 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDH1Q08174 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 MIR1262-201ENST00000408276 93 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDH1Q08174 CST2P1-201ENST00000425770 87 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 AC009238.1-201ENST00000442165 424 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 AC009237.6-201ENST00000446969 424 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 RN7SL75P-201ENST00000461926 281 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 AL163195.1-201ENST00000496941 348 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH1Q08174 SCARNA15-202ENST00000516881 127 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDH1Q08174 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDH1Q08174 AC092435.3-201ENST00000565538 3654 ntBASIC3.01□□□□□ -1.93
PCDH1Q08174 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
PCDH1Q08174 Y_RNA.309-201ENST00000365046 111 ntBASIC3□□□□□ -1.93
PCDH1Q08174 U8.9-201ENST00000365667 134 ntBASIC3□□□□□ -1.93
PCDH1Q08174 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
PCDH1Q08174 AC007064.1-201ENST00000412238 351 ntBASIC3□□□□□ -1.93
PCDH1Q08174 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
PCDH1Q08174 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3□□□□□ -1.93
PCDH1Q08174 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
PCDH1Q08174 MIR5197-201ENST00000583721 112 ntBASIC3□□□□□ -1.93
PCDH1Q08174 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3□□□□□ -1.93
PCDH1Q08174 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3□□□□□ -1.93
PCDH1Q08174 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
PCDH1Q08174 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
PCDH1Q08174 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3□□□□□ -1.93
PCDH1Q08174 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH1Q08174 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDH1Q08174 SNORD68-201ENST00000363214 84 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 Y_RNA.528-201ENST00000384575 108 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 SNORD15B-201ENST00000384714 146 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 NDUFB4P4-201ENST00000404822 243 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 RNA5SP89-201ENST00000410300 108 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH1Q08174 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDH1Q08174 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 RNU6-168P-201ENST00000516189 101 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms