Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SNORA63D-201ENST00000364359 132 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RNU6-1019P-201ENST00000364424 107 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RNU6-326P-201ENST00000365480 107 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RNU6-439P-201ENST00000384188 106 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RNU6-505P-201ENST00000384427 107 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RNU6-713P-201ENST00000384761 107 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 MT-TW-201ENST00000387382 68 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 CYCSP49-201ENST00000420810 319 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 POLR2KP2-201ENST00000438155 177 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 RPS27P22-201ENST00000478056 241 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AC027419.1-201ENST00000522976 328 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 MIR5094-201ENST00000578766 85 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 DEFB117-201ENST00000602356 141 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AC069114.2-201ENST00000604699 304 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AL359075.3-201ENST00000613288 217 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AP001282.2-201ENST00000616149 309 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 AC010615.1-201ENST00000594254 1764 ntBASIC1.23□□□□□ -2.21
CKAP4Q07065 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CKAP4Q07065 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.23□□□□□ -2.21
CKAP4Q07065 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
CKAP4Q07065 MIR335-201ENST00000362173 94 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-112P-201ENST00000363599 104 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-324P-201ENST00000363957 106 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-407P-201ENST00000365280 104 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-296P-201ENST00000384608 107 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 Y_RNA.569-201ENST00000384749 103 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CKAP4Q07065 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-710P-201ENST00000410424 105 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.22□□□□□ -2.21
CKAP4Q07065 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.22□□□□□ -2.21
CKAP4Q07065 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.22□□□□□ -2.21
CKAP4Q07065 AC010154.1-201ENST00000425857 269 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 TRBVB-201ENST00000477100 408 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RPL36AP21-201ENST00000490372 323 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 AC099513.1-201ENST00000490423 301 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-1338P-201ENST00000516328 91 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 RNU6-1337P-201ENST00000516525 95 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.22□□□□□ -2.21
CKAP4Q07065 AC084364.2-201ENST00000546924 395 ntBASIC1.22□□□□□ -2.21
CKAP4Q07065 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.22□□□□□ -2.21
CKAP4Q07065 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.22□□□□□ -2.21
CKAP4Q07065 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CKAP4Q07065 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.16-201ENST00000362421 102 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.172-201ENST00000363765 102 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.368-201ENST00000365547 113 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.396-201ENST00000383949 103 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.461-201ENST00000384263 103 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.483-201ENST00000384380 101 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.556-201ENST00000384677 113 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 MIR1302-6-201ENST00000408466 90 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 MTCO1P5-201ENST00000433573 344 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 MTND4LP30-201ENST00000454092 297 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 AL163195.1-201ENST00000496941 348 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU1-41P-201ENST00000516161 162 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 Y_RNA.668-201ENST00000516233 93 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU6-191P-201ENST00000516295 94 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU1-48P-201ENST00000516400 162 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU1-142P-201ENST00000516682 145 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU2-31P-201ENST00000516954 155 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU6-570P-201ENST00000517051 105 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 RNU7-172P-201ENST00000517125 64 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 MIR3145-201ENST00000580727 82 ntBASIC1.21□□□□□ -2.22
CKAP4Q07065 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.21□□□□□ -2.22
CKAP4Q07065 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
CKAP4Q07065 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CKAP4Q07065 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CKAP4Q07065 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CKAP4Q07065 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 Y_RNA.310-201ENST00000365063 113 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 Y_RNA.456-201ENST00000384232 111 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 RNU6-463P-201ENST00000384340 107 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 SNORA53-201ENST00000391141 249 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 MIR1302-3-201ENST00000408128 138 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 RNU6-1186P-201ENST00000410429 97 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 AC024067.1-201ENST00000426199 223 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 AC010409.1-201ENST00000487382 476 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 SERF1AP1-201ENST00000514575 187 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 RNU6-1278P-201ENST00000516130 107 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 MIR4503-201ENST00000582187 83 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 AC073413.2-201ENST00000604332 360 ntBASIC1.2□□□□□ -2.22
CKAP4Q07065 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.2□□□□□ -2.22
CKAP4Q07065 AC018630.2-201ENST00000534866 2403 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 UBE2WP1-201ENST00000362030 340 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 Y_RNA.144-201ENST00000363521 113 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 Y_RNA.237-201ENST00000364439 102 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.19□□□□□ -2.22
CKAP4Q07065 Y_RNA.452-201ENST00000384202 108 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 RNU6-196P-201ENST00000384315 107 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 SNORD116-13-201ENST00000384408 92 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 RNA5SP323-201ENST00000391094 133 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 RNU6-1248P-201ENST00000391096 64 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms