Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-1096P-201ENST00000517089 102 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.22□□□□□ -2.21
GABPAQ06546 MIR3664-201ENST00000579074 99 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 MIR4795-201ENST00000584182 89 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 AC104985.2-201ENST00000620598 500 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 MIR4272-201ENST00000635924 64 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 U6.92-201ENST00000636464 89 ntBASIC1.22□□□□□ -2.21
GABPAQ06546 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
GABPAQ06546 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
GABPAQ06546 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GABPAQ06546 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 Y_RNA.446-201ENST00000384178 104 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 Y_RNA.508-201ENST00000384502 114 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 RNU5A-5P-201ENST00000411054 116 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 Y_RNA.621-201ENST00000411065 96 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 AC093850.1-201ENST00000454121 251 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 AL117351.2-201ENST00000513571 157 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 SNORA4-201ENST00000584302 138 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 MIR8065-201ENST00000620577 100 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
GABPAQ06546 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.21□□□□□ -2.22
GABPAQ06546 RNU6-424P-201ENST00000384367 105 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 RNA5SP482-201ENST00000391269 118 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 AL354751.2-201ENST00000415471 210 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 DYNLT3P2-201ENST00000442517 295 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 MTND3P22-201ENST00000510932 243 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
GABPAQ06546 RNU6-1115P-201ENST00000362490 106 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 Y_RNA.39-201ENST00000362620 98 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 RNU4-73P-201ENST00000363164 141 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 RNU4-41P-201ENST00000364426 143 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 Y_RNA.496-201ENST00000384444 101 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.19□□□□□ -2.22
GABPAQ06546 AL162725.1-201ENST00000435405 301 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.19□□□□□ -2.22
GABPAQ06546 Z98949.2-201ENST00000440996 144 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 RPS29P30-201ENST00000600975 111 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 AC068647.2-201ENST00000637380 353 ntBASIC1.19□□□□□ -2.22
GABPAQ06546 Y_RNA.5-201ENST00000362334 102 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 Y_RNA.80-201ENST00000362996 102 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 Y_RNA.230-201ENST00000364348 109 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNU6-1175P-201ENST00000365200 107 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 Y_RNA.361-201ENST00000365515 120 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 Y_RNA.485-201ENST00000384395 102 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNY1P14-201ENST00000384426 108 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 Y_RNA.579-201ENST00000390939 94 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNU6-1199P-201ENST00000411249 104 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 AF228730.4-201ENST00000421457 183 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 HSPE1P13-201ENST00000451143 297 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNU6-436P-201ENST00000516171 114 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNU6-966P-201ENST00000516479 104 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RNU6-113P-201ENST00000516653 101 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 RAB11AP2-201ENST00000545905 639 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 MIR5188-201ENST00000583467 113 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 AL513534.2-201ENST00000603836 250 ntBASIC1.18□□□□□ -2.22
GABPAQ06546 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.17□□□□□ -2.22
GABPAQ06546 Y_RNA.252-201ENST00000364556 101 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 SNORD116-13-201ENST00000384408 92 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 MT-TD-201ENST00000387419 68 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 AL160004.2-201ENST00000432935 350 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.17□□□□□ -2.22
GABPAQ06546 RNU6-976P-201ENST00000516086 111 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 RNU4-77P-201ENST00000516692 156 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 RN7SKP295-201ENST00000517264 153 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 RNU6-1116P-201ENST00000517269 99 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 AL358944.1-201ENST00000528537 144 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 AC022441.3-201ENST00000605737 136 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 AC091925.1-201ENST00000623204 462 ntBASIC1.17□□□□□ -2.22
GABPAQ06546 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
GABPAQ06546 RNU4-79P-201ENST00000362764 141 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 SNORD68-201ENST00000363214 84 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 Y_RNA.172-201ENST00000363765 102 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 Y_RNA.329-201ENST00000365209 107 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 RNU2-61P-201ENST00000411069 191 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 MTND1P14-201ENST00000427400 950 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 Y_RNA.772-201ENST00000606692 102 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 AC006157.1-201ENST00000611750 366 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 AL606534.2-204ENST00000635008 178 ntBASIC1.16□□□□□ -2.22
GABPAQ06546 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
GABPAQ06546 Y_RNA.315-201ENST00000365117 102 ntBASIC1.15□□□□□ -2.23
GABPAQ06546 RNU1-115P-201ENST00000365329 160 ntBASIC1.15□□□□□ -2.23
GABPAQ06546 RNU6-163P-201ENST00000384396 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms