Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP003072.1-201ENST00000531740 145 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 MIR4499-201ENST00000584834 69 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 DEFB131E-202ENST00000602581 683 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC063944.3-201ENST00000609969 533 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC023510.2-201ENST00000622162 746 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC010332.2-201ENST00000613083 1904 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 SNORD115-2-201ENST00000362842 82 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-901P-201ENST00000384593 106 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.43□□□□□ -2.48
HSPG2P98160 PRDX4P1-201ENST00000507189 574 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 POLR3GP2-201ENST00000588366 668 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 SNORA70.25-201ENST00000612741 95 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AL596211.1-201ENST00000569873 2277 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RPS29P13-201ENST00000402041 169 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AP000542.1-201ENST00000448473 371 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.43□□□□□ -2.48
HSPG2P98160 BNIP3P39-201ENST00000601077 554 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-873P-201ENST00000363833 107 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-847P-201ENST00000411115 108 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AL390729.2-201ENST00000416137 156 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AL355994.1-201ENST00000424379 260 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 TPTE2P1-204ENST00000435256 593 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 MRPS10P1-201ENST00000448483 130 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.43□□□□□ -2.48
HSPG2P98160 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 RNU6-25P-201ENST00000383873 107 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 RNU6-29P-201ENST00000384637 107 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 SNORD41.1-201ENST00000391000 69 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MTCYBP4-201ENST00000401524 249 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.44□□□□□ -2.48
HSPG2P98160 SNORD123-201ENST00000459473 70 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MTND3P25-201ENST00000509243 135 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC107027.2-201ENST00000512197 115 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC107934.1-201ENST00000522215 217 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR4762-201ENST00000585261 75 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR8066-201ENST00000617280 78 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC073869.9-201ENST00000641610 120 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC114491.1-201ENST00000416095 246 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.44□□□□□ -2.48
HSPG2P98160 PIGPP3-201ENST00000425307 415 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AL353572.1-201ENST00000442490 417 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.44□□□□□ -2.48
HSPG2P98160 AF186996.7-201ENST00000492781 209 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.44□□□□□ -2.48
HSPG2P98160 MIR5708-201ENST00000579723 85 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 RNU6-387P-201ENST00000411331 105 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AL358934.1-201ENST00000432346 324 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 RNU7-67P-201ENST00000459003 62 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AC005178.1-201ENST00000508392 440 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 AP003168.1-201ENST00000530091 307 ntBASIC-0.44□□□□□ -2.48
HSPG2P98160 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
HSPG2P98160 SNORD68-201ENST00000363214 84 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORD38C-201ENST00000384381 69 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORD28-201ENST00000384706 75 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SUMO1P3-201ENST00000439961 304 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 HMGN2P32-201ENST00000444648 269 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU7-73P-201ENST00000458743 63 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU7-51P-201ENST00000516560 62 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 AGGF1P4-201ENST00000568249 801 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 uc_338.10-201ENST00000621872 182 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORA1.2-201ENST00000365189 134 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORD93-201ENST00000408813 74 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.45□□□□□ -2.48
HSPG2P98160 AL031779.1-201ENST00000415663 330 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.45□□□□□ -2.48
HSPG2P98160 MTND1P14-201ENST00000427400 950 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC137499.1-201ENST00000427602 88 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.45□□□□□ -2.48
HSPG2P98160 MTND1P11-201ENST00000456661 876 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.45□□□□□ -2.48
HSPG2P98160 RPL23AP75-201ENST00000491601 451 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.45□□□□□ -2.48
HSPG2P98160 RNA5SP54-201ENST00000516951 92 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms