Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BTF3P11-201ENST00000426582 477 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.49□□□□□ -2.49
HIST1H3AP68431 UQCRBP2-201ENST00000447827 297 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 AC005042.3-201ENST00000453230 174 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 RNU7-62P-201ENST00000458856 62 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 RNU7-187P-201ENST00000458985 68 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 RNU6-329P-201ENST00000459618 107 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 AC010486.3-201ENST00000511602 785 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 SNORA18.4-201ENST00000516440 124 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 AC026371.1-201ENST00000551867 419 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 AC240442.1-201ENST00000616055 283 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 MTND1P7-201ENST00000632801 297 ntBASIC-0.49□□□□□ -2.49
HIST1H3AP68431 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.49□□□□□ -2.49
HIST1H3AP68431 SNORD113-7-201ENST00000363762 77 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 SNORD50B-201ENST00000364995 70 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 RNU6-131P-201ENST00000391144 107 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 MIR892B-201ENST00000401279 77 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AL358934.1-201ENST00000432346 324 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC104692.1-201ENST00000472406 90 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 RNU4-49P-201ENST00000516080 140 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC093023.1-201ENST00000547375 507 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AL118558.2-201ENST00000556294 238 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.5□□□□□ -2.49
HIST1H3AP68431 uc_338.4-201ENST00000616635 176 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC073534.2-201ENST00000620377 381 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.5□□□□□ -2.49
HIST1H3AP68431 AC106754.1-201ENST00000562632 1513 ntBASIC-0.5□□□□□ -2.49
HIST1H3AP68431 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 SNORD38C-201ENST00000384381 69 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 RNU6-925P-201ENST00000384629 104 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 RNU6-248P-201ENST00000410720 107 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 RNU7-159P-201ENST00000459284 62 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.51□□□□□ -2.49
HIST1H3AP68431 AC005609.4-201ENST00000625071 447 ntBASIC-0.51□□□□□ -2.49
HIST1H3AP68431 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 MIR125B2-201ENST00000385128 89 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 ELOCP21-201ENST00000412558 336 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 CYCSP46-201ENST00000423569 204 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.52□□□□□ -2.49
HIST1H3AP68431 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.52□□□□□ -2.49
HIST1H3AP68431 RNU6-469P-201ENST00000516253 101 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 POLR3GP2-201ENST00000588366 668 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 Z94722.1-201ENST00000604328 474 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 AC005828.6-201ENST00000606610 232 ntBASIC-0.52□□□□□ -2.49
HIST1H3AP68431 RNU4-21P-201ENST00000362802 126 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 RNU4-66P-201ENST00000365199 138 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 RNU6-281P-201ENST00000384212 103 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 MIR329-2-201ENST00000385029 84 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 SNORA26-201ENST00000391286 122 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 AC116353.2-201ENST00000505332 712 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 RNU7-175P-201ENST00000515915 61 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 RNU6-448P-201ENST00000517052 107 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 RNU7-156P-201ENST00000517214 74 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.53□□□□□ -2.49
HIST1H3AP68431 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.53□□□□□ -2.49
HIST1H3AP68431 SNORA72.1-201ENST00000363485 129 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 SNORD14E-201ENST00000364009 85 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 SNORA1.1-201ENST00000364671 133 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
HIST1H3AP68431 RNA5SP401-201ENST00000515920 127 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 SCARNA8-201ENST00000515924 131 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.54□□□□□ -2.5
HIST1H3AP68431 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.54□□□□□ -2.5
HIST1H3AP68431 MIR3913-1-201ENST00000577744 102 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 AC090616.2-202ENST00000584248 222 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 MIR7107-201ENST00000611489 80 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 FAM157A-202ENST00000615155 405 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 AC023510.2-201ENST00000622162 746 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.54□□□□□ -2.5
HIST1H3AP68431 AC010332.2-201ENST00000613083 1904 ntBASIC-0.54□□□□□ -2.5
HIST1H3AP68431 U8.17-201ENST00000391292 132 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 MIR1257-201ENST00000408490 117 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.55□□□□□ -2.5
HIST1H3AP68431 SNRPGP10-201ENST00000432323 225 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.55□□□□□ -2.5
HIST1H3AP68431 SNORA25.10-201ENST00000515926 124 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 ACA59.1-201ENST00000515966 143 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 SNORD92-201ENST00000585078 85 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 MIR4791-201ENST00000607666 84 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 AC092807.2-201ENST00000609367 243 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 uc_338.6-201ENST00000613544 171 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 SNORD38B-202ENST00000625943 69 ntBASIC-0.55□□□□□ -2.5
HIST1H3AP68431 SNORD114-7-201ENST00000362520 77 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 MTCO2P27-201ENST00000420740 428 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 AL512326.2-201ENST00000426359 151 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 USP9YP16-201ENST00000430287 407 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 USP9YP23-201ENST00000455085 407 ntBASIC-0.56□□□□□ -2.5
HIST1H3AP68431 RNU7-165P-201ENST00000458864 60 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms