Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 STAG3L5P-204ENST00000443759 179 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 MTND4P19-201ENST00000446659 478 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 RPS4XP11-201ENST00000446897 772 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 AC092991.1-201ENST00000477176 376 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 SNORA40.14-201ENST00000516543 86 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ACTA1P68133 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTA1P68133 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTA1P68133 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 AC005176.2-201ENST00000596933 147 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 AC004832.4-201ENST00000608952 331 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 AC127459.3-201ENST00000624328 466 ntBASIC0.97□□□□□ -2.25
ACTA1P68133 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.61-201ENST00000362835 102 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.813-201ENST00000364639 102 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.327-201ENST00000365201 102 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.338-201ENST00000365320 114 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.535-201ENST00000384612 99 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 RNU6-136P-201ENST00000384663 107 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 MIR628-201ENST00000385229 95 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 U8.16-201ENST00000391279 133 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.96□□□□□ -2.26
ACTA1P68133 HSPE1P13-201ENST00000451143 297 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AL049830.1-201ENST00000468034 425 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 MIR4498-201ENST00000577599 66 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 MIR3684-201ENST00000579779 74 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
ACTA1P68133 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AC006157.1-201ENST00000611750 366 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 AL513423.1-201ENST00000621695 132 ntBASIC0.96□□□□□ -2.26
ACTA1P68133 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ACTA1P68133 Y_RNA.230-201ENST00000364348 109 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU4-41P-201ENST00000364426 143 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 Y_RNA.267-201ENST00000364679 109 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU6-1175P-201ENST00000365200 107 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU6-1310P-201ENST00000384153 107 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 MIR660-201ENST00000385235 97 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 Y_RNA.604-201ENST00000410574 102 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.95□□□□□ -2.26
ACTA1P68133 AL160004.2-201ENST00000432935 350 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 AL162725.1-201ENST00000435405 301 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU6-155P-201ENST00000516347 100 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNA5SP168-201ENST00000516642 112 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU6-1096P-201ENST00000517089 102 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RN7SKP295-201ENST00000517264 153 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 RNU6-1116P-201ENST00000517269 99 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
ACTA1P68133 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ACTA1P68133 Y_RNA.105-201ENST00000363182 111 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 Y_RNA.286-201ENST00000364813 102 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 Y_RNA.329-201ENST00000365209 107 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU6-937P-201ENST00000384325 106 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU6-376P-201ENST00000384731 106 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 SNORD41-201ENST00000386967 70 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 MIR1302-11-201ENST00000408051 138 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 MIR1302-9-201ENST00000408365 138 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 MIR1302-10-201ENST00000408734 138 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.94□□□□□ -2.26
ACTA1P68133 RNU7-94P-201ENST00000459576 63 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU6-1278P-201ENST00000516130 107 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 RNU6-917P-201ENST00000516294 104 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AC040926.1-201ENST00000530195 238 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AC104695.3-201ENST00000604052 296 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AL359821.1-201ENST00000605519 182 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 MIR1302-2-201ENST00000607096 138 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AC073349.3-201ENST00000617616 186 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 AL160413.1-201ENST00000622780 310 ntBASIC0.94□□□□□ -2.26
ACTA1P68133 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ACTA1P68133 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
ACTA1P68133 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
ACTA1P68133 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
ACTA1P68133 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
ACTA1P68133 Y_RNA.39-201ENST00000362620 98 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 Y_RNA.216-201ENST00000364205 93 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
ACTA1P68133 AL590004.1-201ENST00000405321 300 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 RNU4-30P-201ENST00000410245 143 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 SUMO1P2-201ENST00000452524 304 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 AC093850.1-201ENST00000454121 251 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 Y_RNA.638-201ENST00000459374 113 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 RNU6-475P-201ENST00000516073 104 ntBASIC0.93□□□□□ -2.26
ACTA1P68133 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.93□□□□□ -2.26
ACTA1P68133 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms