Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
SEC61A1P61619 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SEC61A1P61619 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.1
SEC61A1P61619 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU6-23P-201ENST00000363283 107 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 Y_RNA.180-201ENST00000363867 113 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU6-1062P-201ENST00000383908 107 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU6-160P-201ENST00000384591 107 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 Y_RNA.571-201ENST00000384753 98 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 MIR1261-201ENST00000408659 82 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 MIR1278-201ENST00000408753 81 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SEC61A1P61619 AC018634.1-201ENST00000437554 401 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC245047.8-201ENST00000456455 284 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RPL23AP54-201ENST00000495129 419 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.9□□□□□ -2.11
SEC61A1P61619 YWHAEP4-201ENST00000505390 198 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC097462.1-201ENST00000514125 324 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 RNU6-453P-201ENST00000516819 85 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AL137100.2-201ENST00000555786 315 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 MIR3169-201ENST00000578032 83 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC005972.2-201ENST00000604690 348 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.9□□□□□ -2.11
SEC61A1P61619 AC104465.1-201ENST00000611365 139 ntBASIC1.9□□□□□ -2.11
SEC61A1P61619 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SEC61A1P61619 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SEC61A1P61619 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 RNU6-774P-201ENST00000363238 107 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 Y_RNA.238-201ENST00000364441 102 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 RNU4-70P-201ENST00000384579 139 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 SNORA8.3-201ENST00000384679 139 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 MIR626-201ENST00000385032 94 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 MT-TT-201ENST00000387460 66 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 EBAG9P1-201ENST00000418955 543 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
SEC61A1P61619 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.89□□□□□ -2.11
SEC61A1P61619 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 SCARNA8-201ENST00000515924 131 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 Y_RNA.662-201ENST00000516028 97 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.89□□□□□ -2.11
SEC61A1P61619 Y_RNA.802-201ENST00000614892 130 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 U6.73-201ENST00000619194 103 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
SEC61A1P61619 Y_RNA.7-201ENST00000362352 102 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 RNU1-58P-201ENST00000362413 163 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 Y_RNA.182-201ENST00000363880 111 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 RNU6-381P-201ENST00000391259 108 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 RN7SKP284-201ENST00000411002 343 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AL162725.1-201ENST00000435405 301 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.88□□□□□ -2.11
SEC61A1P61619 RPS29P21-201ENST00000496272 170 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.88□□□□□ -2.11
SEC61A1P61619 RNU6-1007P-201ENST00000516586 107 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 RNU6-255P-201ENST00000516957 105 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AC127455.1-201ENST00000565496 145 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AL929325.1-201ENST00000603096 117 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AP003357.1-201ENST00000604497 148 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 AC009831.4-201ENST00000620744 325 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 U6.106-201ENST00000636360 105 ntBASIC1.88□□□□□ -2.11
SEC61A1P61619 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SEC61A1P61619 MIR367-201ENST00000362299 68 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 Y_RNA.8-201ENST00000362353 102 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 Y_RNA.412-201ENST00000384001 104 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RNU6-1323P-201ENST00000384025 107 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 SNORA40.19-201ENST00000390846 128 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RNU11-3P-201ENST00000391111 133 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 SNORD23.1-201ENST00000408212 104 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 AL356320.1-201ENST00000429616 163 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RPS4XP11-201ENST00000446897 772 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RNU6-1278P-201ENST00000516130 107 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 RNU7-128P-201ENST00000517247 62 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 MRPS18CP4-201ENST00000535821 231 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 MIR4724-201ENST00000579485 89 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 MIR6132-201ENST00000622083 109 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 AC021753.1-201ENST00000635724 168 ntBASIC1.87□□□□□ -2.11
SEC61A1P61619 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SEC61A1P61619 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms