Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC240442.1-201ENST00000616055 283 ntBASIC0.98□□□□□ -2.25
SRP54P61011 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.98□□□□□ -2.25
SRP54P61011 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
SRP54P61011 Y_RNA.363-201ENST00000365529 113 ntBASIC0.97□□□□□ -2.25
SRP54P61011 RNU6-163P-201ENST00000384396 106 ntBASIC0.97□□□□□ -2.25
SRP54P61011 MIR526A1-201ENST00000384897 85 ntBASIC0.97□□□□□ -2.25
SRP54P61011 Y_RNA.619-201ENST00000410951 90 ntBASIC0.97□□□□□ -2.25
SRP54P61011 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
SRP54P61011 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
SRP54P61011 RNU6-120P-201ENST00000516077 103 ntBASIC0.97□□□□□ -2.25
SRP54P61011 SNORD111.1-201ENST00000516421 86 ntBASIC0.97□□□□□ -2.25
SRP54P61011 AC022616.4-201ENST00000522985 181 ntBASIC0.97□□□□□ -2.25
SRP54P61011 AC055872.1-201ENST00000570978 278 ntBASIC0.97□□□□□ -2.25
SRP54P61011 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
SRP54P61011 MIR4762-201ENST00000585261 75 ntBASIC0.97□□□□□ -2.25
SRP54P61011 Y_RNA.336-201ENST00000365307 109 ntBASIC0.96□□□□□ -2.26
SRP54P61011 RNU6-926P-201ENST00000384075 107 ntBASIC0.96□□□□□ -2.26
SRP54P61011 RNY1P14-201ENST00000384426 108 ntBASIC0.96□□□□□ -2.26
SRP54P61011 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
SRP54P61011 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
SRP54P61011 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
SRP54P61011 RNU6-470P-201ENST00000515954 104 ntBASIC0.96□□□□□ -2.26
SRP54P61011 RNU6-1116P-201ENST00000517269 99 ntBASIC0.96□□□□□ -2.26
SRP54P61011 AC005176.2-201ENST00000596933 147 ntBASIC0.96□□□□□ -2.26
SRP54P61011 AC113139.1-201ENST00000605049 239 ntBASIC0.96□□□□□ -2.26
SRP54P61011 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.96□□□□□ -2.26
SRP54P61011 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SRP54P61011 SNORD68-201ENST00000363214 84 ntBASIC0.95□□□□□ -2.26
SRP54P61011 Y_RNA.796-201ENST00000364268 102 ntBASIC0.95□□□□□ -2.26
SRP54P61011 Y_RNA.799-201ENST00000364992 102 ntBASIC0.95□□□□□ -2.26
SRP54P61011 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
SRP54P61011 Y_RNA.474-201ENST00000384341 102 ntBASIC0.95□□□□□ -2.26
SRP54P61011 MIR200A-201ENST00000384875 90 ntBASIC0.95□□□□□ -2.26
SRP54P61011 Y_RNA.621-201ENST00000411065 96 ntBASIC0.95□□□□□ -2.26
SRP54P61011 RNU2-61P-201ENST00000411069 191 ntBASIC0.95□□□□□ -2.26
SRP54P61011 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
SRP54P61011 Y_RNA.653-201ENST00000459091 95 ntBASIC0.95□□□□□ -2.26
SRP54P61011 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
SRP54P61011 PRDX4P1-201ENST00000507189 574 ntBASIC0.95□□□□□ -2.26
SRP54P61011 RNA5SP220-201ENST00000516298 104 ntBASIC0.95□□□□□ -2.26
SRP54P61011 RNU6-911P-201ENST00000516523 104 ntBASIC0.95□□□□□ -2.26
SRP54P61011 RNU6-1012P-201ENST00000516606 109 ntBASIC0.95□□□□□ -2.26
SRP54P61011 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.95□□□□□ -2.26
SRP54P61011 AC011604.1-201ENST00000545978 196 ntBASIC0.95□□□□□ -2.26
SRP54P61011 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SRP54P61011 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SRP54P61011 Y_RNA.101-201ENST00000363154 102 ntBASIC0.94□□□□□ -2.26
SRP54P61011 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
SRP54P61011 Y_RNA.605-201ENST00000410577 105 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.94□□□□□ -2.26
SRP54P61011 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.94□□□□□ -2.26
SRP54P61011 AC093019.1-201ENST00000443135 252 ntBASIC0.94□□□□□ -2.26
SRP54P61011 CHEK2P4-201ENST00000450340 246 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AC245047.8-201ENST00000456455 284 ntBASIC0.94□□□□□ -2.26
SRP54P61011 RNU6-559P-201ENST00000516151 98 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.94□□□□□ -2.26
SRP54P61011 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AL096861.1-201ENST00000610899 123 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AL391903.3-201ENST00000612158 163 ntBASIC0.94□□□□□ -2.26
SRP54P61011 AL591926.4-201ENST00000616895 298 ntBASIC0.94□□□□□ -2.26
SRP54P61011 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
SRP54P61011 Y_RNA.230-201ENST00000364348 109 ntBASIC0.93□□□□□ -2.26
SRP54P61011 RNU6-42P-201ENST00000384165 107 ntBASIC0.93□□□□□ -2.26
SRP54P61011 MIR628-201ENST00000385229 95 ntBASIC0.93□□□□□ -2.26
SRP54P61011 PIGPP3-201ENST00000425307 415 ntBASIC0.93□□□□□ -2.26
SRP54P61011 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.93□□□□□ -2.26
SRP54P61011 AC099799.1-201ENST00000439809 192 ntBASIC0.93□□□□□ -2.26
SRP54P61011 U8.19-201ENST00000459095 133 ntBASIC0.93□□□□□ -2.26
SRP54P61011 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
SRP54P61011 RPS26P48-201ENST00000491713 339 ntBASIC0.93□□□□□ -2.26
SRP54P61011 AC114811.1-201ENST00000507207 168 ntBASIC0.93□□□□□ -2.26
SRP54P61011 PRELID3BP2-201ENST00000605362 201 ntBASIC0.93□□□□□ -2.26
SRP54P61011 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
SRP54P61011 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
SRP54P61011 U2.1-201ENST00000618978 145 ntBASIC0.93□□□□□ -2.26
SRP54P61011 AL008636.1-201ENST00000625038 1018 ntBASIC0.93□□□□□ -2.26
SRP54P61011 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU6-490P-201ENST00000362985 107 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU6-969P-201ENST00000383900 105 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU6-20P-201ENST00000384106 107 ntBASIC0.92□□□□□ -2.26
SRP54P61011 SNORD116-13-201ENST00000384408 92 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU6-1297P-201ENST00000384415 104 ntBASIC0.92□□□□□ -2.26
SRP54P61011 Y_RNA.599-201ENST00000410489 109 ntBASIC0.92□□□□□ -2.26
SRP54P61011 AC098614.3-201ENST00000438957 440 ntBASIC0.92□□□□□ -2.26
SRP54P61011 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
SRP54P61011 MTCO3P10-201ENST00000455912 772 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RPL30P15-201ENST00000457129 321 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
SRP54P61011 RNU7-169P-201ENST00000459456 61 ntBASIC0.92□□□□□ -2.26
SRP54P61011 snoU13.18-201ENST00000459483 104 ntBASIC0.92□□□□□ -2.26
SRP54P61011 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
SRP54P61011 MIR6734-201ENST00000621166 68 ntBASIC0.92□□□□□ -2.26
SRP54P61011 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SRP54P61011 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.92□□□□□ -2.26
SRP54P61011 RNU6-626P-201ENST00000363354 107 ntBASIC0.91□□□□□ -2.26
SRP54P61011 Y_RNA.446-201ENST00000384178 104 ntBASIC0.91□□□□□ -2.26
SRP54P61011 MIR15B-201ENST00000385045 98 ntBASIC0.91□□□□□ -2.26
SRP54P61011 RNU6-1199P-201ENST00000411249 104 ntBASIC0.91□□□□□ -2.26
SRP54P61011 RPEP5-201ENST00000441137 268 ntBASIC0.91□□□□□ -2.26
SRP54P61011 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms