Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ERVFC1-1P60608 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.86□□□□□ -2.11
ERVFC1-1P60608 AC062016.1-201ENST00000355719 319 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 RNA5SP456-201ENST00000364002 114 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 SNORD114-6-201ENST00000364393 72 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 RNU1-112P-201ENST00000364401 164 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 Y_RNA.400-201ENST00000383963 111 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 MIR9-1-201ENST00000385198 89 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 RNU6-239P-201ENST00000390990 99 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 HMGN2P34-201ENST00000437647 269 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 SNORD109B-201ENST00000458961 67 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 SNORD109A-201ENST00000459128 67 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 RNU6-437P-201ENST00000459408 95 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 AC008413.1-201ENST00000511864 177 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 SNORA4.4-201ENST00000515921 135 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 SNORD116-25-201ENST00000516517 92 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 RNU7-116P-201ENST00000516940 62 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 MIR4672-201ENST00000583126 81 ntBASIC1.86□□□□□ -2.11
ERVFC1-1P60608 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ERVFC1-1P60608 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ERVFC1-1P60608 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ERVFC1-1P60608 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 MIR21-201ENST00000362134 72 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 RNU6-674P-201ENST00000363831 107 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 RNU6-1228P-201ENST00000391014 107 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 RNU6-131P-201ENST00000391144 107 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 RPS4XP11-201ENST00000446897 772 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 RNU7-172P-201ENST00000517125 64 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 AL929325.1-201ENST00000603096 117 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 AL021707.8-201ENST00000609428 183 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 AL449363.1-201ENST00000617815 186 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 U6.73-201ENST00000619194 103 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 Y_RNA.778-201ENST00000620203 90 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 MIR3658-201ENST00000636291 56 ntBASIC1.85□□□□□ -2.11
ERVFC1-1P60608 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ERVFC1-1P60608 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ERVFC1-1P60608 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ERVFC1-1P60608 RNU6-151P-201ENST00000364158 107 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 Y_RNA.215-201ENST00000364204 112 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 SNORA72-201ENST00000384339 132 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 RNU6-417P-201ENST00000384712 107 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 MIR15B-201ENST00000385045 98 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 SNORD23.1-201ENST00000408212 104 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 MIR1262-201ENST00000408276 93 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AL606753.1-201ENST00000427435 87 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AL121914.1-201ENST00000450188 156 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC011406.1-201ENST00000512440 370 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC096725.1-201ENST00000514266 313 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 RNU7-128P-201ENST00000517247 62 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 NDUFA5P6-201ENST00000542110 379 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.84□□□□□ -2.11
ERVFC1-1P60608 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.84□□□□□ -2.11
ERVFC1-1P60608 U4.3-201ENST00000621047 82 ntBASIC1.84□□□□□ -2.11
ERVFC1-1P60608 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
ERVFC1-1P60608 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
ERVFC1-1P60608 MIR449A-201ENST00000362113 91 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 snoU2-30.2-201ENST00000362805 70 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 RNU4-13P-201ENST00000364019 141 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.488-201ENST00000384403 102 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 MIR1253-201ENST00000408273 105 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 RNA5SP508-201ENST00000411327 119 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 AL109933.2-201ENST00000452651 260 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.83□□□□□ -2.12
ERVFC1-1P60608 AC107027.2-201ENST00000512197 115 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.83□□□□□ -2.12
ERVFC1-1P60608 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 MIR338-201ENST00000636369 67 ntBASIC1.83□□□□□ -2.12
ERVFC1-1P60608 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ERVFC1-1P60608 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6-81P-201ENST00000365608 104 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6-643P-201ENST00000384018 107 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6-376P-201ENST00000384731 106 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.568-201ENST00000384742 113 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 MIR569-201ENST00000385228 96 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNA5SP467-201ENST00000391274 118 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 AC006461.1-201ENST00000412637 326 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.82□□□□□ -2.12
ERVFC1-1P60608 AL353689.1-201ENST00000438895 199 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 SNRPGP8-201ENST00000454064 226 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RN7SKP132-201ENST00000516001 208 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNA5SP272-201ENST00000516095 111 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6-1041P-201ENST00000516254 102 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 RNU6-426P-201ENST00000516464 97 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.82□□□□□ -2.12
ERVFC1-1P60608 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.82□□□□□ -2.12
ERVFC1-1P60608 DNAJC19P2-201ENST00000593340 302 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms