Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PER3P56645 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
PER3P56645 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PER3P56645 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PER3P56645 Y_RNA.121-201ENST00000363309 113 ntBASIC2.37□□□□□ -2.03
PER3P56645 Y_RNA.229-201ENST00000364347 113 ntBASIC2.37□□□□□ -2.03
PER3P56645 Y_RNA.412-201ENST00000384001 104 ntBASIC2.37□□□□□ -2.03
PER3P56645 RNU4-70P-201ENST00000384579 139 ntBASIC2.37□□□□□ -2.03
PER3P56645 SNORA67.4-201ENST00000384688 142 ntBASIC2.37□□□□□ -2.03
PER3P56645 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
PER3P56645 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
PER3P56645 MT-TT-201ENST00000387460 66 ntBASIC2.37□□□□□ -2.03
PER3P56645 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
PER3P56645 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
PER3P56645 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
PER3P56645 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
PER3P56645 AL163195.1-201ENST00000496941 348 ntBASIC2.37□□□□□ -2.03
PER3P56645 Y_RNA.662-201ENST00000516028 97 ntBASIC2.37□□□□□ -2.03
PER3P56645 RN7SKP164-201ENST00000516138 266 ntBASIC2.37□□□□□ -2.03
PER3P56645 AC011604.1-201ENST00000545978 196 ntBASIC2.37□□□□□ -2.03
PER3P56645 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
PER3P56645 U4.3-201ENST00000621047 82 ntBASIC2.37□□□□□ -2.03
PER3P56645 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PER3P56645 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PER3P56645 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PER3P56645 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PER3P56645 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
PER3P56645 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
PER3P56645 RNU5E-9P-201ENST00000411164 104 ntBASIC2.36□□□□□ -2.03
PER3P56645 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
PER3P56645 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
PER3P56645 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.36□□□□□ -2.03
PER3P56645 AC245047.8-201ENST00000456455 284 ntBASIC2.36□□□□□ -2.03
PER3P56645 snoU13.23-201ENST00000458863 104 ntBASIC2.36□□□□□ -2.03
PER3P56645 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.36□□□□□ -2.03
PER3P56645 RNA5SP282-201ENST00000516355 108 ntBASIC2.36□□□□□ -2.03
PER3P56645 RNU1-142P-201ENST00000516682 145 ntBASIC2.36□□□□□ -2.03
PER3P56645 RNU6-1096P-201ENST00000517089 102 ntBASIC2.36□□□□□ -2.03
PER3P56645 AC005786.1-201ENST00000588553 154 ntBASIC2.36□□□□□ -2.03
PER3P56645 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
PER3P56645 MIR6079-201ENST00000635807 62 ntBASIC2.36□□□□□ -2.03
PER3P56645 AC100821.1-201ENST00000523153 2479 ntBASIC2.36□□□□□ -2.03
PER3P56645 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
PER3P56645 AC018630.2-201ENST00000534866 2403 ntBASIC2.36□□□□□ -2.03
PER3P56645 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
PER3P56645 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PER3P56645 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PER3P56645 MIR367-201ENST00000362299 68 ntBASIC2.35□□□□□ -2.03
PER3P56645 Y_RNA.75-201ENST00000362927 97 ntBASIC2.35□□□□□ -2.03
PER3P56645 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
PER3P56645 Y_RNA.464-201ENST00000384282 110 ntBASIC2.35□□□□□ -2.03
PER3P56645 SNORA8-201ENST00000384574 139 ntBASIC2.35□□□□□ -2.03
PER3P56645 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
PER3P56645 MIR616-201ENST00000385293 97 ntBASIC2.35□□□□□ -2.03
PER3P56645 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
PER3P56645 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
PER3P56645 RPS15AP28-201ENST00000435088 386 ntBASIC2.35□□□□□ -2.03
PER3P56645 AC018634.1-201ENST00000437554 401 ntBASIC2.35□□□□□ -2.03
PER3P56645 SUMO1P3-201ENST00000439961 304 ntBASIC2.35□□□□□ -2.03
PER3P56645 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
PER3P56645 AC024995.1-201ENST00000523014 93 ntBASIC2.35□□□□□ -2.03
PER3P56645 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
PER3P56645 AL365434.2-201ENST00000607979 234 ntBASIC2.35□□□□□ -2.03
PER3P56645 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
PER3P56645 AC108706.1-201ENST00000611053 297 ntBASIC2.35□□□□□ -2.03
PER3P56645 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
PER3P56645 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PER3P56645 Y_RNA.182-201ENST00000363880 111 ntBASIC2.34□□□□□ -2.03
PER3P56645 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
PER3P56645 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
PER3P56645 MIR520G-201ENST00000385064 90 ntBASIC2.34□□□□□ -2.03
PER3P56645 RNU6-1135P-201ENST00000411083 103 ntBASIC2.34□□□□□ -2.03
PER3P56645 Z98742.3-201ENST00000418637 326 ntBASIC2.34□□□□□ -2.03
PER3P56645 AL606517.2-201ENST00000442855 241 ntBASIC2.34□□□□□ -2.03
PER3P56645 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.34□□□□□ -2.03
PER3P56645 AC108210.2-201ENST00000503681 201 ntBASIC2.34□□□□□ -2.03
PER3P56645 RNU6-1291P-201ENST00000516591 104 ntBASIC2.34□□□□□ -2.03
PER3P56645 RNU6-255P-201ENST00000516957 105 ntBASIC2.34□□□□□ -2.03
PER3P56645 RNU6-1212P-201ENST00000517023 104 ntBASIC2.34□□□□□ -2.03
PER3P56645 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.34□□□□□ -2.03
PER3P56645 MIR4744-201ENST00000581563 82 ntBASIC2.34□□□□□ -2.03
PER3P56645 AL021707.8-201ENST00000609428 183 ntBASIC2.34□□□□□ -2.03
PER3P56645 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
PER3P56645 RNU6-103P-201ENST00000363686 107 ntBASIC2.33□□□□□ -2.04
PER3P56645 Y_RNA.203-201ENST00000364106 102 ntBASIC2.33□□□□□ -2.04
PER3P56645 RNU6-578P-201ENST00000390980 103 ntBASIC2.33□□□□□ -2.04
PER3P56645 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
PER3P56645 RNA5SP323-201ENST00000391094 133 ntBASIC2.33□□□□□ -2.04
PER3P56645 RN7SKP101-201ENST00000411376 320 ntBASIC2.33□□□□□ -2.04
PER3P56645 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PER3P56645 RNU6-341P-201ENST00000516973 96 ntBASIC2.33□□□□□ -2.04
PER3P56645 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.33□□□□□ -2.04
PER3P56645 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.33□□□□□ -2.04
PER3P56645 AC022217.4-201ENST00000604389 163 ntBASIC2.33□□□□□ -2.04
PER3P56645 AL391903.3-201ENST00000612158 163 ntBASIC2.33□□□□□ -2.04
PER3P56645 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
PER3P56645 AC245060.5-201ENST00000610778 3293 ntBASIC2.33□□□□□ -2.04
PER3P56645 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PER3P56645 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
PER3P56645 Y_RNA.796-201ENST00000364268 102 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms