Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
PEX3P56589 OR9P1P-201ENST00000496431 281 ntBASIC1.31□□□□□ -2.2
PEX3P56589 SNORA70.12-201ENST00000516084 153 ntBASIC1.31□□□□□ -2.2
PEX3P56589 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.31□□□□□ -2.2
PEX3P56589 AC022616.4-201ENST00000522985 181 ntBASIC1.31□□□□□ -2.2
PEX3P56589 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.31□□□□□ -2.2
PEX3P56589 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.31□□□□□ -2.2
PEX3P56589 AC006380.1-201ENST00000603598 186 ntBASIC1.31□□□□□ -2.2
PEX3P56589 RAC1P9-201ENST00000604990 392 ntBASIC1.31□□□□□ -2.2
PEX3P56589 AC004832.4-201ENST00000608952 331 ntBASIC1.31□□□□□ -2.2
PEX3P56589 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PEX3P56589 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.31□□□□□ -2.2
PEX3P56589 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.3□□□□□ -2.2
PEX3P56589 Y_RNA.216-201ENST00000364205 93 ntBASIC1.3□□□□□ -2.2
PEX3P56589 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
PEX3P56589 SNORA63.7-201ENST00000365579 123 ntBASIC1.3□□□□□ -2.2
PEX3P56589 Y_RNA.439-201ENST00000384119 94 ntBASIC1.3□□□□□ -2.2
PEX3P56589 RNU6-937P-201ENST00000384325 106 ntBASIC1.3□□□□□ -2.2
PEX3P56589 RNU6-376P-201ENST00000384731 106 ntBASIC1.3□□□□□ -2.2
PEX3P56589 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
PEX3P56589 RN7SKP200-201ENST00000410564 320 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AL390729.2-201ENST00000416137 156 ntBASIC1.3□□□□□ -2.2
PEX3P56589 MTCO2P12-201ENST00000427426 682 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AL135790.2-201ENST00000437701 267 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.3□□□□□ -2.2
PEX3P56589 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
PEX3P56589 Y_RNA.713-201ENST00000517013 96 ntBASIC1.3□□□□□ -2.2
PEX3P56589 Y_RNA.715-201ENST00000517082 110 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AL358944.1-201ENST00000528537 144 ntBASIC1.3□□□□□ -2.2
PEX3P56589 MIR3171-201ENST00000584270 74 ntBASIC1.3□□□□□ -2.2
PEX3P56589 AL513423.1-201ENST00000621695 132 ntBASIC1.3□□□□□ -2.2
PEX3P56589 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
PEX3P56589 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PEX3P56589 MIRLET7C-201ENST00000362160 84 ntBASIC1.29□□□□□ -2.2
PEX3P56589 MIR562-201ENST00000384894 95 ntBASIC1.29□□□□□ -2.2
PEX3P56589 MIR520G-201ENST00000385064 90 ntBASIC1.29□□□□□ -2.2
PEX3P56589 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
PEX3P56589 RNA5SP511-201ENST00000410487 115 ntBASIC1.29□□□□□ -2.2
PEX3P56589 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
PEX3P56589 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
PEX3P56589 RPS4XP11-201ENST00000446897 772 ntBASIC1.29□□□□□ -2.2
PEX3P56589 Y_RNA.701-201ENST00000516812 110 ntBASIC1.29□□□□□ -2.2
PEX3P56589 AP002004.2-201ENST00000531656 154 ntBASIC1.29□□□□□ -2.2
PEX3P56589 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
PEX3P56589 Y_RNA.143-201ENST00000363520 106 ntBASIC1.28□□□□□ -2.2
PEX3P56589 Y_RNA.222-201ENST00000364264 102 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RNU4-76P-201ENST00000364509 141 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
PEX3P56589 Y_RNA.329-201ENST00000365209 107 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RNU6-424P-201ENST00000384367 105 ntBASIC1.28□□□□□ -2.2
PEX3P56589 MIR1252-201ENST00000408861 65 ntBASIC1.28□□□□□ -2.2
PEX3P56589 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.28□□□□□ -2.2
PEX3P56589 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
PEX3P56589 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.28□□□□□ -2.2
PEX3P56589 RNA5SP445-201ENST00000515889 115 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RNU6-1291P-201ENST00000516591 104 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RNU6-1096P-201ENST00000517089 102 ntBASIC1.28□□□□□ -2.2
PEX3P56589 RPL21P9-201ENST00000556149 474 ntBASIC1.28□□□□□ -2.2
PEX3P56589 AL162424.1-201ENST00000602325 221 ntBASIC1.28□□□□□ -2.2
PEX3P56589 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
PEX3P56589 Y_RNA.105-201ENST00000363182 111 ntBASIC1.27□□□□□ -2.21
PEX3P56589 Y_RNA.158-201ENST00000363651 101 ntBASIC1.27□□□□□ -2.21
PEX3P56589 RNU6-450P-201ENST00000364654 107 ntBASIC1.27□□□□□ -2.21
PEX3P56589 Y_RNA.286-201ENST00000364813 102 ntBASIC1.27□□□□□ -2.21
PEX3P56589 Y_RNA.310-201ENST00000365063 113 ntBASIC1.27□□□□□ -2.21
PEX3P56589 Y_RNA.331-201ENST00000365267 102 ntBASIC1.27□□□□□ -2.21
PEX3P56589 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
PEX3P56589 MIR513A1-201ENST00000385138 129 ntBASIC1.27□□□□□ -2.21
PEX3P56589 AL034345.1-201ENST00000407768 123 ntBASIC1.27□□□□□ -2.21
PEX3P56589 STAG3L5P-204ENST00000443759 179 ntBASIC1.27□□□□□ -2.21
PEX3P56589 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
PEX3P56589 RNU6-1046P-201ENST00000516538 107 ntBASIC1.27□□□□□ -2.21
PEX3P56589 RNU6-988P-201ENST00000519081 107 ntBASIC1.27□□□□□ -2.21
PEX3P56589 MIR4300-201ENST00000581016 96 ntBASIC1.27□□□□□ -2.21
PEX3P56589 DEFB117-201ENST00000602356 141 ntBASIC1.27□□□□□ -2.21
PEX3P56589 AC124312.5-201ENST00000604451 268 ntBASIC1.27□□□□□ -2.21
PEX3P56589 AC073349.3-201ENST00000617616 186 ntBASIC1.27□□□□□ -2.21
PEX3P56589 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
PEX3P56589 Y_RNA.183-201ENST00000363882 113 ntBASIC1.26□□□□□ -2.21
PEX3P56589 Y_RNA.267-201ENST00000364679 109 ntBASIC1.26□□□□□ -2.21
PEX3P56589 Y_RNA.368-201ENST00000365547 113 ntBASIC1.26□□□□□ -2.21
PEX3P56589 MIR660-201ENST00000385235 97 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
PEX3P56589 SNORD115-46-201ENST00000390982 71 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU4-30P-201ENST00000410245 143 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU6-121P-201ENST00000410525 99 ntBASIC1.26□□□□□ -2.21
PEX3P56589 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.26□□□□□ -2.21
PEX3P56589 RPS20P10-201ENST00000451209 253 ntBASIC1.26□□□□□ -2.21
PEX3P56589 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.26□□□□□ -2.21
PEX3P56589 AL049830.1-201ENST00000468034 425 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU7-28P-201ENST00000516759 62 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU6-1137P-201ENST00000517073 99 ntBASIC1.26□□□□□ -2.21
PEX3P56589 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
PEX3P56589 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.26□□□□□ -2.21
PEX3P56589 MIR4680-201ENST00000580906 66 ntBASIC1.26□□□□□ -2.21
PEX3P56589 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.26□□□□□ -2.21
PEX3P56589 SNORA28-201ENST00000606769 126 ntBASIC1.26□□□□□ -2.21
PEX3P56589 AC011373.1-201ENST00000607270 237 ntBASIC1.26□□□□□ -2.21
PEX3P56589 AC040896.1-201ENST00000613819 479 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms