Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MTND2P14-201ENST00000482139 351 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.28□□□□□ -2.45
FOXA3P55318 RNU4-49P-201ENST00000516080 140 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 RNA5SP330-201ENST00000517096 96 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC134698.4-201ENST00000523451 826 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC093023.1-201ENST00000547375 507 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC100830.2-201ENST00000581636 240 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC005730.3-201ENST00000583067 366 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 MIR4264-201ENST00000583520 66 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 POLR3GP2-201ENST00000588366 668 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC010525.2-201ENST00000590920 195 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 MIR4791-201ENST00000607666 84 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 MIR7107-201ENST00000611489 80 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 uc_338.4-201ENST00000616635 176 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 AC067863.3-201ENST00000624172 122 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 MIR1295B-201ENST00000636144 60 ntBASIC-0.28□□□□□ -2.45
FOXA3P55318 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.28□□□□□ -2.45
FOXA3P55318 AC010332.2-201ENST00000613083 1904 ntBASIC-0.28□□□□□ -2.46
FOXA3P55318 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 U8.17-201ENST00000391292 132 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
FOXA3P55318 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 AC090844.1-201ENST00000422019 156 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.29□□□□□ -2.46
FOXA3P55318 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 RNU6-448P-201ENST00000517052 107 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 RNU7-181P-201ENST00000517234 74 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 MRPS36P3-201ENST00000519284 130 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 AC005176.2-201ENST00000596933 147 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 AL357075.2-201ENST00000614906 189 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 FAM157A-202ENST00000615155 405 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 SNORD38B-202ENST00000625943 69 ntBASIC-0.29□□□□□ -2.46
FOXA3P55318 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.29□□□□□ -2.46
FOXA3P55318 RNU4-21P-201ENST00000362802 126 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 SNORA2A-201ENST00000383885 135 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNU6-38P-201ENST00000384085 107 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.3□□□□□ -2.46
FOXA3P55318 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AL606489.2-201ENST00000433886 234 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 MTND4LP16-201ENST00000440828 295 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.3□□□□□ -2.46
FOXA3P55318 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNU7-125P-201ENST00000458760 62 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNU7-159P-201ENST00000459284 62 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNU7-175P-201ENST00000515915 61 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNA5SP401-201ENST00000515920 127 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 SNORA18.4-201ENST00000516440 124 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AC090616.2-202ENST00000584248 222 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AC092807.2-201ENST00000609367 243 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 AC240442.1-201ENST00000616055 283 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.3□□□□□ -2.46
FOXA3P55318 AC099654.12-201ENST00000639868 649 ntBASIC-0.3□□□□□ -2.46
FOXA3P55318 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 SNORD38C-201ENST00000384381 69 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 RNU6-855P-201ENST00000410395 104 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 RNA5SP475-201ENST00000410568 110 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.31□□□□□ -2.46
FOXA3P55318 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.31□□□□□ -2.46
FOXA3P55318 MTND3P23-201ENST00000431980 347 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 SUMO1P3-201ENST00000439961 304 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.31□□□□□ -2.46
FOXA3P55318 RNU7-185P-201ENST00000459215 60 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 RNU6-759P-201ENST00000516740 103 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 SNORD92-201ENST00000585078 85 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 AC005828.6-201ENST00000606610 232 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 Pinc.1-201ENST00000616452 154 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 AF246928.1-201ENST00000623768 87 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 AC005609.4-201ENST00000625071 447 ntBASIC-0.31□□□□□ -2.46
FOXA3P55318 SNORD14E-201ENST00000364009 85 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 RNU4-20P-201ENST00000365601 151 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 RNY3P10-201ENST00000384764 102 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 MIR329-1-201ENST00000385028 80 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 MIR613-201ENST00000385248 95 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 MIR1257-201ENST00000408490 117 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 MTND2P18-201ENST00000419962 1030 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.32□□□□□ -2.46
FOXA3P55318 AL512326.2-201ENST00000426359 151 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 SNORD4A-201ENST00000459174 72 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 RPL39P34-201ENST00000477141 156 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AC091959.1-201ENST00000495857 238 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.32□□□□□ -2.46
FOXA3P55318 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 RNU6-469P-201ENST00000516253 101 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AC060788.1-201ENST00000521318 469 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AC018448.1-201ENST00000552843 316 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.32□□□□□ -2.46
FOXA3P55318 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.32□□□□□ -2.46
FOXA3P55318 AC005972.2-201ENST00000604690 348 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms