Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC004832.4-201ENST00000608952 331 ntBASIC1.42□□□□□ -2.18
CDH13P55290 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH13P55290 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDH13P55290 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CDH13P55290 Y_RNA.368-201ENST00000365547 113 ntBASIC1.41□□□□□ -2.18
CDH13P55290 Y_RNA.380-201ENST00000365663 111 ntBASIC1.41□□□□□ -2.18
CDH13P55290 Y_RNA.456-201ENST00000384232 111 ntBASIC1.41□□□□□ -2.18
CDH13P55290 RNU6-21P-201ENST00000384710 107 ntBASIC1.41□□□□□ -2.18
CDH13P55290 MIR1252-201ENST00000408861 65 ntBASIC1.41□□□□□ -2.18
CDH13P55290 RNU6-101P-201ENST00000410323 104 ntBASIC1.41□□□□□ -2.18
CDH13P55290 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
CDH13P55290 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
CDH13P55290 AC104695.3-201ENST00000604052 296 ntBASIC1.41□□□□□ -2.18
CDH13P55290 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.41□□□□□ -2.18
CDH13P55290 Y_RNA.138-201ENST00000363462 102 ntBASIC1.4□□□□□ -2.19
CDH13P55290 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
CDH13P55290 Y_RNA.183-201ENST00000363882 113 ntBASIC1.4□□□□□ -2.19
CDH13P55290 RNU4-41P-201ENST00000364426 143 ntBASIC1.4□□□□□ -2.19
CDH13P55290 RNU4-76P-201ENST00000364509 141 ntBASIC1.4□□□□□ -2.19
CDH13P55290 SNORA72-201ENST00000384339 132 ntBASIC1.4□□□□□ -2.19
CDH13P55290 RNU6-1105P-201ENST00000384774 107 ntBASIC1.4□□□□□ -2.19
CDH13P55290 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
CDH13P55290 U8.16-201ENST00000391279 133 ntBASIC1.4□□□□□ -2.19
CDH13P55290 CALM2P4-201ENST00000430810 426 ntBASIC1.4□□□□□ -2.19
CDH13P55290 Z98949.2-201ENST00000440996 144 ntBASIC1.4□□□□□ -2.19
CDH13P55290 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
CDH13P55290 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH13P55290 AC011604.1-201ENST00000545978 196 ntBASIC1.4□□□□□ -2.19
CDH13P55290 MIR4524B-201ENST00000581569 115 ntBASIC1.4□□□□□ -2.19
CDH13P55290 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
CDH13P55290 AL078604.3-201ENST00000615580 211 ntBASIC1.4□□□□□ -2.19
CDH13P55290 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
CDH13P55290 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CDH13P55290 MIRLET7C-201ENST00000362160 84 ntBASIC1.39□□□□□ -2.19
CDH13P55290 Y_RNA.11-201ENST00000362375 109 ntBASIC1.39□□□□□ -2.19
CDH13P55290 RNU6-199P-201ENST00000362954 107 ntBASIC1.39□□□□□ -2.19
CDH13P55290 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
CDH13P55290 Y_RNA.310-201ENST00000365063 113 ntBASIC1.39□□□□□ -2.19
CDH13P55290 SNORA22B-201ENST00000383876 138 ntBASIC1.39□□□□□ -2.19
CDH13P55290 RNU6-1323P-201ENST00000384025 107 ntBASIC1.39□□□□□ -2.19
CDH13P55290 RNU6-855P-201ENST00000410395 104 ntBASIC1.39□□□□□ -2.19
CDH13P55290 HMGN1P10-201ENST00000474557 553 ntBASIC1.39□□□□□ -2.19
CDH13P55290 RNU7-116P-201ENST00000516940 62 ntBASIC1.39□□□□□ -2.19
CDH13P55290 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
CDH13P55290 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.39□□□□□ -2.19
CDH13P55290 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH13P55290 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDH13P55290 Y_RNA.158-201ENST00000363651 101 ntBASIC1.38□□□□□ -2.19
CDH13P55290 Y_RNA.341-201ENST00000365341 102 ntBASIC1.38□□□□□ -2.19
CDH13P55290 Y_RNA.389-201ENST00000383924 113 ntBASIC1.38□□□□□ -2.19
CDH13P55290 MIR653-201ENST00000385279 96 ntBASIC1.38□□□□□ -2.19
CDH13P55290 RNU6-1248P-201ENST00000391096 64 ntBASIC1.38□□□□□ -2.19
CDH13P55290 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.38□□□□□ -2.19
CDH13P55290 RNU4-30P-201ENST00000410245 143 ntBASIC1.38□□□□□ -2.19
CDH13P55290 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
CDH13P55290 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
CDH13P55290 AC020661.2-201ENST00000560114 134 ntBASIC1.38□□□□□ -2.19
CDH13P55290 AC136932.1-201ENST00000574771 208 ntBASIC1.38□□□□□ -2.19
CDH13P55290 MIR3171-201ENST00000584270 74 ntBASIC1.38□□□□□ -2.19
CDH13P55290 MIR4762-201ENST00000585261 75 ntBASIC1.38□□□□□ -2.19
CDH13P55290 DEFB117-201ENST00000602356 141 ntBASIC1.38□□□□□ -2.19
CDH13P55290 AL353997.5-201ENST00000618886 171 ntBASIC1.38□□□□□ -2.19
CDH13P55290 AC027279.3-201ENST00000625055 122 ntBASIC1.38□□□□□ -2.19
CDH13P55290 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
CDH13P55290 RNU6-833P-201ENST00000363486 107 ntBASIC1.37□□□□□ -2.19
CDH13P55290 Y_RNA.222-201ENST00000364264 102 ntBASIC1.37□□□□□ -2.19
CDH13P55290 U8.5-201ENST00000364528 136 ntBASIC1.37□□□□□ -2.19
CDH13P55290 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
CDH13P55290 SNORD115-46-201ENST00000390982 71 ntBASIC1.37□□□□□ -2.19
CDH13P55290 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
CDH13P55290 RNU6-897P-201ENST00000517135 105 ntBASIC1.37□□□□□ -2.19
CDH13P55290 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
CDH13P55290 MIR3664-201ENST00000579074 99 ntBASIC1.37□□□□□ -2.19
CDH13P55290 MIR4300-201ENST00000581016 96 ntBASIC1.37□□□□□ -2.19
CDH13P55290 AP001485.1-201ENST00000604799 199 ntBASIC1.37□□□□□ -2.19
CDH13P55290 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH13P55290 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
CDH13P55290 Y_RNA.202-201ENST00000364083 110 ntBASIC1.36□□□□□ -2.19
CDH13P55290 Y_RNA.383-201ENST00000383855 97 ntBASIC1.36□□□□□ -2.19
CDH13P55290 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
CDH13P55290 Y_RNA.621-201ENST00000411065 96 ntBASIC1.36□□□□□ -2.19
CDH13P55290 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH13P55290 POLR2KP2-201ENST00000438155 177 ntBASIC1.36□□□□□ -2.19
CDH13P55290 AC092991.1-201ENST00000477176 376 ntBASIC1.36□□□□□ -2.19
CDH13P55290 CYCTP-201ENST00000504253 315 ntBASIC1.36□□□□□ -2.19
CDH13P55290 RNU6-1046P-201ENST00000516538 107 ntBASIC1.36□□□□□ -2.19
CDH13P55290 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
CDH13P55290 MIR4778-201ENST00000577635 80 ntBASIC1.36□□□□□ -2.19
CDH13P55290 RAC1P9-201ENST00000604990 392 ntBASIC1.36□□□□□ -2.19
CDH13P55290 MIR376A1-201ENST00000616574 68 ntBASIC1.36□□□□□ -2.19
CDH13P55290 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
CDH13P55290 Y_RNA.276-201ENST00000364732 109 ntBASIC1.35□□□□□ -2.19
CDH13P55290 SNORA2.2-201ENST00000365473 135 ntBASIC1.35□□□□□ -2.19
CDH13P55290 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
CDH13P55290 Y_RNA.455-201ENST00000384230 98 ntBASIC1.35□□□□□ -2.19
CDH13P55290 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDH13P55290 RNU6-482P-201ENST00000391068 107 ntBASIC1.35□□□□□ -2.19
CDH13P55290 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
CDH13P55290 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms