Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 Y_RNA.483-201ENST00000384380 101 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 SNORD116-13-201ENST00000384408 92 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 MT-TW-201ENST00000387382 68 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 RNA5SP109-201ENST00000391010 116 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 snosnR66.1-201ENST00000391095 99 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 SNORA53-201ENST00000391141 249 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 RNA5SP511-201ENST00000410487 115 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 SCARNA24.2-201ENST00000516968 130 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 DEFB108E-201ENST00000524692 240 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 AL161670.1-201ENST00000554348 137 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NR1H2P55055 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NR1H2P55055 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.12
NR1H2P55055 Y_RNA.136-201ENST00000363444 102 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 Y_RNA.341-201ENST00000365341 102 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 Y_RNA.396-201ENST00000383949 103 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 MIR1302-3-201ENST00000408128 138 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 MTCO1P5-201ENST00000433573 344 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 AL606517.2-201ENST00000442855 241 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 RNU6-191P-201ENST00000516295 94 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 RNU6-1338P-201ENST00000516328 91 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 AC037487.3-201ENST00000606668 112 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.83□□□□□ -2.12
NR1H2P55055 U6.104-201ENST00000637979 90 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 AC018630.2-201ENST00000534866 2403 ntBASIC1.83□□□□□ -2.12
NR1H2P55055 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NR1H2P55055 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
NR1H2P55055 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NR1H2P55055 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NR1H2P55055 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 SNORA25.1-201ENST00000362326 128 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RNU6-326P-201ENST00000365480 107 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RNU6-439P-201ENST00000384188 106 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RNU6-472P-201ENST00000384299 107 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.82□□□□□ -2.12
NR1H2P55055 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RPS20P10-201ENST00000451209 253 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 RNU7-34P-201ENST00000459394 64 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AC091021.1-201ENST00000468051 388 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.82□□□□□ -2.12
NR1H2P55055 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
NR1H2P55055 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AC004832.4-201ENST00000608952 331 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.82□□□□□ -2.12
NR1H2P55055 AP001282.2-201ENST00000616149 309 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 MIR6079-201ENST00000635807 62 ntBASIC1.82□□□□□ -2.12
NR1H2P55055 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
NR1H2P55055 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NR1H2P55055 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
NR1H2P55055 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NR1H2P55055 Y_RNA.237-201ENST00000364439 102 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 Y_RNA.310-201ENST00000365063 113 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 RNU6-514P-201ENST00000384208 107 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 RNU6-1248P-201ENST00000391096 64 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 RNA5SP247-201ENST00000411181 105 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 AL162725.1-201ENST00000435405 301 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 AC015720.1-201ENST00000565251 277 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.81□□□□□ -2.12
NR1H2P55055 AL512605.2-201ENST00000592972 256 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 SNORA28-201ENST00000606769 126 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
NR1H2P55055 AC100821.1-201ENST00000523153 2479 ntBASIC1.81□□□□□ -2.12
NR1H2P55055 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NR1H2P55055 AL391987.6-201ENST00000305671 199 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 RNU4-13P-201ENST00000364019 141 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 Y_RNA.267-201ENST00000364679 109 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 Y_RNA.368-201ENST00000365547 113 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 Y_RNA.456-201ENST00000384232 111 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 AL034345.1-201ENST00000407768 123 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 AL135790.2-201ENST00000437701 267 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 MTND4LP30-201ENST00000454092 297 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 SERF1AP1-201ENST00000514575 187 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
NR1H2P55055 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.8□□□□□ -2.12
NR1H2P55055 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NR1H2P55055 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NR1H2P55055 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NR1H2P55055 RNU6-1123P-201ENST00000362347 106 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 SNORA4.2-201ENST00000365313 147 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 RNU6-574P-201ENST00000384265 107 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 RNU6-196P-201ENST00000384315 107 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 HSPE1P21-201ENST00000438283 308 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 AC233266.1-201ENST00000454518 96 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 AC091959.1-201ENST00000495857 238 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 RNU6-1291P-201ENST00000516591 104 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 MIR4503-201ENST00000582187 83 ntBASIC1.79□□□□□ -2.12
NR1H2P55055 AC091178.2-201ENST00000584401 117 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms