Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 RPL23AP36-201ENST00000413895 458 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.32□□□□□ -2.2
CLNS1AP54105 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 DEFB117-201ENST00000602356 141 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AC011373.1-201ENST00000607270 237 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AC010205.1-201ENST00000616668 449 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 AL138825.1-201ENST00000618587 192 ntBASIC1.32□□□□□ -2.2
CLNS1AP54105 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CLNS1AP54105 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 RNU4-79P-201ENST00000362764 141 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 Y_RNA.253-201ENST00000364562 112 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 RNU1-115P-201ENST00000365329 160 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 RNU6-937P-201ENST00000384325 106 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 RNY1P14-201ENST00000384426 108 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CLNS1AP54105 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.31□□□□□ -2.2
CLNS1AP54105 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 SNORA31.4-201ENST00000516049 129 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 MIR3145-201ENST00000580727 82 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 AL121655.1-201ENST00000605811 308 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 AL008636.1-201ENST00000625038 1018 ntBASIC1.31□□□□□ -2.2
CLNS1AP54105 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
CLNS1AP54105 Y_RNA.143-201ENST00000363520 106 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 Y_RNA.341-201ENST00000365341 102 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 MIR516B2-201ENST00000385190 85 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 AL590004.1-201ENST00000405321 300 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 SNORA11.2-201ENST00000408318 127 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.3□□□□□ -2.2
CLNS1AP54105 LINC01399-202ENST00000458450 244 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 SNORA40.14-201ENST00000516543 86 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 MIR4423-201ENST00000580922 80 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 AC007485.1-201ENST00000616755 206 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 AC027335.2-201ENST00000624030 375 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 AC027279.3-201ENST00000625055 122 ntBASIC1.3□□□□□ -2.2
CLNS1AP54105 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CLNS1AP54105 SNORD81.1-201ENST00000363064 77 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 Y_RNA.197-201ENST00000364004 102 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 Y_RNA.439-201ENST00000384119 94 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 MT-TD-201ENST00000387419 68 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 MIR1298-201ENST00000408783 112 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 RNU6-710P-201ENST00000410424 105 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 SNORD13-201ENST00000459299 104 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 AC022616.4-201ENST00000522985 181 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
CLNS1AP54105 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.29□□□□□ -2.2
CLNS1AP54105 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.29□□□□□ -2.2
CLNS1AP54105 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLNS1AP54105 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLNS1AP54105 Y_RNA.471-201ENST00000384312 102 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 SNORA72-201ENST00000384339 132 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 AL390729.2-201ENST00000416137 156 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 AL133255.1-201ENST00000606374 441 ntBASIC1.28□□□□□ -2.2
CLNS1AP54105 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.28□□□□□ -2.2
CLNS1AP54105 U8.5-201ENST00000364528 136 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 Y_RNA.419-201ENST00000384041 102 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 Y_RNA.462-201ENST00000384268 102 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 RNU6-21P-201ENST00000384710 107 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 MIR452-201ENST00000385020 85 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 U8.20-201ENST00000459445 131 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 HMGN1P7-201ENST00000491722 313 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.27□□□□□ -2.21
CLNS1AP54105 AC040926.1-201ENST00000530195 238 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 AL080274.1-201ENST00000605565 220 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
CLNS1AP54105 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLNS1AP54105 MIR369-201ENST00000362155 70 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 Y_RNA.336-201ENST00000365307 109 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 Y_RNA.363-201ENST00000365529 113 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 RNU6-308P-201ENST00000390957 107 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 RNU6-131P-201ENST00000391144 107 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 SNRPGP10-201ENST00000432323 225 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 AL591806.2-201ENST00000433122 173 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 snoU13.23-201ENST00000458863 104 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 RNU6-1170P-201ENST00000515974 106 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 SNORD45.4-201ENST00000516629 73 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
CLNS1AP54105 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CLNS1AP54105 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CLNS1AP54105 Y_RNA.310-201ENST00000365063 113 ntBASIC1.25□□□□□ -2.21
CLNS1AP54105 SNORD14.1-201ENST00000365609 90 ntBASIC1.25□□□□□ -2.21
CLNS1AP54105 Y_RNA.551-201ENST00000384661 102 ntBASIC1.25□□□□□ -2.21
CLNS1AP54105 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.25□□□□□ -2.21
CLNS1AP54105 AC024067.1-201ENST00000426199 223 ntBASIC1.25□□□□□ -2.21
CLNS1AP54105 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.25□□□□□ -2.21
CLNS1AP54105 AC117454.1-201ENST00000491120 168 ntBASIC1.25□□□□□ -2.21
CLNS1AP54105 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 312 ms