Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Y_RNA.312-201ENST00000365089 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.322-201ENST00000365151 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 RNU6-338P-201ENST00000383888 105 ntBASIC2.15□□□□□ -2.07
COPAP53621 SNORD116-13-201ENST00000384408 92 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.515-201ENST00000384535 112 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.539-201ENST00000384635 107 ntBASIC2.15□□□□□ -2.07
COPAP53621 RNU2-2P-201ENST00000410396 191 ntBASIC2.15□□□□□ -2.07
COPAP53621 AL135790.2-201ENST00000437701 267 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.650-201ENST00000459002 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 RPL36AP21-201ENST00000490372 323 ntBASIC2.15□□□□□ -2.07
COPAP53621 RNU6-63P-201ENST00000516690 95 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.777-201ENST00000516982 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.15□□□□□ -2.07
COPAP53621 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.15□□□□□ -2.07
COPAP53621 AC084364.2-201ENST00000546924 395 ntBASIC2.15□□□□□ -2.07
COPAP53621 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.771-201ENST00000598668 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 AL078604.3-201ENST00000615580 211 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.789-201ENST00000622480 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 AC068647.2-201ENST00000637380 353 ntBASIC2.15□□□□□ -2.07
COPAP53621 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
COPAP53621 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COPAP53621 Y_RNA.172-201ENST00000363765 102 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNU6-801P-201ENST00000364087 105 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNU6-117P-201ENST00000365415 107 ntBASIC2.14□□□□□ -2.07
COPAP53621 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.14□□□□□ -2.07
COPAP53621 SNORA72.4-201ENST00000384174 132 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNU6-136P-201ENST00000384663 107 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNU6-763P-201ENST00000390865 106 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
COPAP53621 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
COPAP53621 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
COPAP53621 AL163195.1-201ENST00000496941 348 ntBASIC2.14□□□□□ -2.07
COPAP53621 RNU7-128P-201ENST00000517247 62 ntBASIC2.14□□□□□ -2.07
COPAP53621 MIR4643-201ENST00000577473 78 ntBASIC2.14□□□□□ -2.07
COPAP53621 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC005972.2-201ENST00000604690 348 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC004832.4-201ENST00000608952 331 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC090425.1-201ENST00000610007 140 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC141273.2-201ENST00000618989 130 ntBASIC2.14□□□□□ -2.07
COPAP53621 AC078938.1-201ENST00000620993 318 ntBASIC2.14□□□□□ -2.07
COPAP53621 snoU18.1-201ENST00000629629 71 ntBASIC2.14□□□□□ -2.07
COPAP53621 U6.108-201ENST00000637764 58 ntBASIC2.14□□□□□ -2.07
COPAP53621 Y_RNA.122-201ENST00000363331 96 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNU6-899P-201ENST00000363947 107 ntBASIC2.13□□□□□ -2.07
COPAP53621 Y_RNA.269-201ENST00000364685 89 ntBASIC2.13□□□□□ -2.07
COPAP53621 SNORD58.1-201ENST00000391313 66 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNA5SP511-201ENST00000410487 115 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
COPAP53621 AL162725.1-201ENST00000435405 301 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
COPAP53621 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
COPAP53621 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
COPAP53621 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COPAP53621 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
COPAP53621 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COPAP53621 RNU6-1048P-201ENST00000364054 107 ntBASIC2.12□□□□□ -2.07
COPAP53621 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
COPAP53621 SNORA26.5-201ENST00000391215 123 ntBASIC2.12□□□□□ -2.07
COPAP53621 MTCO2P33-201ENST00000402100 465 ntBASIC2.12□□□□□ -2.07
COPAP53621 RNU2-7P-201ENST00000410794 178 ntBASIC2.12□□□□□ -2.07
COPAP53621 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
COPAP53621 AC245047.4-201ENST00000433189 144 ntBASIC2.12□□□□□ -2.07
COPAP53621 AC069257.2-201ENST00000441819 155 ntBASIC2.12□□□□□ -2.07
COPAP53621 SNORD2.1-201ENST00000458762 69 ntBASIC2.12□□□□□ -2.07
COPAP53621 Y_RNA.637-201ENST00000459424 114 ntBASIC2.12□□□□□ -2.07
COPAP53621 AC108210.2-201ENST00000503681 201 ntBASIC2.12□□□□□ -2.07
COPAP53621 RNU7-116P-201ENST00000516940 62 ntBASIC2.12□□□□□ -2.07
COPAP53621 AC015720.1-201ENST00000565251 277 ntBASIC2.12□□□□□ -2.07
COPAP53621 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.12□□□□□ -2.07
COPAP53621 AC073349.3-201ENST00000617616 186 ntBASIC2.12□□□□□ -2.07
COPAP53621 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.12□□□□□ -2.07
COPAP53621 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COPAP53621 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
COPAP53621 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COPAP53621 Y_RNA.257-201ENST00000364596 102 ntBASIC2.11□□□□□ -2.07
COPAP53621 RNU6-1318P-201ENST00000365389 103 ntBASIC2.11□□□□□ -2.07
COPAP53621 MIR520G-201ENST00000385064 90 ntBASIC2.11□□□□□ -2.07
COPAP53621 RNU6-651P-201ENST00000411040 105 ntBASIC2.11□□□□□ -2.07
COPAP53621 RNU2-14P-201ENST00000411053 191 ntBASIC2.11□□□□□ -2.07
COPAP53621 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.11□□□□□ -2.07
COPAP53621 AC104332.1-201ENST00000440471 797 ntBASIC2.11□□□□□ -2.07
COPAP53621 RNU7-141P-201ENST00000459304 62 ntBASIC2.11□□□□□ -2.07
COPAP53621 Y_RNA.638-201ENST00000459374 113 ntBASIC2.11□□□□□ -2.07
COPAP53621 RNU7-94P-201ENST00000459576 63 ntBASIC2.11□□□□□ -2.07
COPAP53621 RPS26P45-201ENST00000471748 340 ntBASIC2.11□□□□□ -2.07
COPAP53621 MIR4282-201ENST00000583613 67 ntBASIC2.11□□□□□ -2.07
COPAP53621 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
COPAP53621 AL008718.3-201ENST00000610217 321 ntBASIC2.11□□□□□ -2.07
COPAP53621 AL442067.1-201ENST00000613261 223 ntBASIC2.11□□□□□ -2.07
COPAP53621 MIR548AY-201ENST00000617669 107 ntBASIC2.11□□□□□ -2.07
COPAP53621 AC134026.1-201ENST00000623249 2239 ntBASIC2.11□□□□□ -2.07
COPAP53621 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COPAP53621 Y_RNA.76-201ENST00000362931 109 ntBASIC2.1□□□□□ -2.07
COPAP53621 Y_RNA.292-201ENST00000364904 97 ntBASIC2.1□□□□□ -2.07
COPAP53621 RNU6-1323P-201ENST00000384025 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms