Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RPS29P21-201ENST00000496272 170 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 RNA5SP437-201ENST00000517249 129 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA1P49639 POLR3GP1-201ENST00000594073 261 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 AL929325.1-201ENST00000603096 117 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 AC005972.2-201ENST00000604690 348 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 AC011921.3-201ENST00000605540 361 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA1P49639 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 MIR548AY-201ENST00000617669 107 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 MIR6079-201ENST00000635807 62 ntBASIC1.68□□□□□ -2.14
HOXA1P49639 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXA1P49639 AC018630.2-201ENST00000534866 2403 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXA1P49639 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HOXA1P49639 Y_RNA.292-201ENST00000364904 97 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 Y_RNA.293-201ENST00000364908 93 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RNU6-1318P-201ENST00000365389 103 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 Y_RNA.478-201ENST00000384358 107 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 Y_RNA.500-201ENST00000384466 111 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 SNORA40.19-201ENST00000390846 128 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RNU6-1248P-201ENST00000391096 64 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RNU4-53P-201ENST00000410828 140 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RNU6-383P-201ENST00000410864 94 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 Y_RNA.621-201ENST00000411065 96 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 SNORD2.1-201ENST00000458762 69 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RPS26P45-201ENST00000471748 340 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 RPL23AP54-201ENST00000495129 419 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA1P49639 RNU7-115P-201ENST00000516433 55 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA1P49639 AC091178.2-201ENST00000584401 117 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 AC013791.1-201ENST00000616619 62 ntBASIC1.67□□□□□ -2.14
HOXA1P49639 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
HOXA1P49639 SNORA1B-201ENST00000362535 133 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.82-201ENST00000363000 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.92-201ENST00000363043 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 RNU6-112P-201ENST00000363599 104 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.235-201ENST00000364412 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.306-201ENST00000365015 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.312-201ENST00000365089 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.322-201ENST00000365151 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.650-201ENST00000459002 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.638-201ENST00000459374 113 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 RNA5SP57-201ENST00000459463 123 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.777-201ENST00000516982 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 AC011604.1-201ENST00000545978 196 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 AC130289.1-201ENST00000577321 73 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 MIR5692C2-201ENST00000577959 77 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 MIR4672-201ENST00000583126 81 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 MIR4282-201ENST00000583613 67 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.771-201ENST00000598668 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXA1P49639 AL442067.1-201ENST00000613261 223 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 Y_RNA.789-201ENST00000622480 102 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
HOXA1P49639 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HOXA1P49639 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HOXA1P49639 AC092881.1-201ENST00000638218 2733 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNA5SP289-201ENST00000362332 137 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 Y_RNA.274-201ENST00000364714 101 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNU6-923P-201ENST00000364753 107 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 SNORD58.1-201ENST00000391313 66 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 SNORA36B-201ENST00000410438 131 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNA5SP100-201ENST00000410903 110 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RNA5SP59-201ENST00000410922 110 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 RN7SKP192-201ENST00000411291 327 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 AC245047.3-201ENST00000429428 127 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXA1P49639 SNORA31.10-201ENST00000516482 106 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXA1P49639 AC127455.1-201ENST00000565496 145 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 MIR4513-201ENST00000581077 86 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 AP003357.1-201ENST00000604497 148 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 AL365265.1-201ENST00000621045 234 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.65□□□□□ -2.15
HOXA1P49639 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
HOXA1P49639 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HOXA1P49639 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HOXA1P49639 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HOXA1P49639 RNU6-899P-201ENST00000363947 107 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 Y_RNA.308-201ENST00000365043 101 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 RNY4P28-201ENST00000365281 93 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 RNU6-1323P-201ENST00000384025 107 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 RNU6-493P-201ENST00000391321 108 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 Y_RNA.626-201ENST00000411288 95 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 RNA5SP508-201ENST00000411327 119 ntBASIC1.64□□□□□ -2.15
HOXA1P49639 AC024995.1-201ENST00000523014 93 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms