Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CCDC34P1-201ENST00000507441 517 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 AC010486.3-201ENST00000511602 785 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 AL157687.1-201ENST00000554853 619 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 MIR3684-201ENST00000579779 74 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 MIR4791-201ENST00000607666 84 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 MIR6740-201ENST00000618268 113 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 AC072046.2-201ENST00000618366 268 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 MIR6828-201ENST00000636181 60 ntBASIC-0.74□□□□□ -2.53
SRP9P49458 RNU6-161P-201ENST00000363051 106 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 RNU6-46P-201ENST00000383860 107 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 RNU6-933P-201ENST00000384424 107 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
SRP9P49458 AC087499.4-201ENST00000448505 178 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 MIR548AB-201ENST00000584917 84 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 MIR3666-201ENST00000607845 111 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 TUSC7.1-201ENST00000610969 165 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 HULC.1-201ENST00000612720 240 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 U6.115-201ENST00000636045 103 ntBASIC-0.75□□□□□ -2.53
SRP9P49458 RNU6-282P-201ENST00000365357 103 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 SNORD14C-201ENST00000365382 88 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 SNORA32.3-201ENST00000384772 121 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
SRP9P49458 MIR18B-201ENST00000454574 71 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
SRP9P49458 AC046134.1-201ENST00000514454 666 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 SNORA25.10-201ENST00000515926 124 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 RNU7-181P-201ENST00000517234 74 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 MIR3682-201ENST00000581338 84 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 AL357078.3-201ENST00000607528 618 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 AC006157.1-201ENST00000611750 366 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 AC016597.2-201ENST00000613256 341 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 FAM157A-202ENST00000615155 405 ntBASIC-0.76□□□□□ -2.53
SRP9P49458 RNU6-500P-201ENST00000362349 107 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RNU4-73P-201ENST00000363164 141 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 MIR604-201ENST00000384880 94 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RNU6-131P-201ENST00000391144 107 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 U8.17-201ENST00000391292 132 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RNU6-855P-201ENST00000410395 104 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 HMGN1P33-201ENST00000432945 451 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 AC009961.2-201ENST00000435771 251 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RNU7-180P-201ENST00000459240 63 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 RPL30P10-201ENST00000488148 337 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 MTCO1P29-201ENST00000496868 288 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 AC116353.2-201ENST00000505332 712 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.77□□□□□ -2.53
SRP9P49458 AP003168.1-201ENST00000530091 307 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 MIR3152-201ENST00000579801 74 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 PIGPP4-201ENST00000584447 307 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 MIR548AZ-201ENST00000616567 95 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 uc_338.22-201ENST00000622722 187 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 AC091304.10-201ENST00000641554 121 ntBASIC-0.77□□□□□ -2.53
SRP9P49458 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 SNORD38C-201ENST00000384381 69 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 RNU6-35P-201ENST00000384530 107 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 RNU6-906P-201ENST00000384700 70 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 MIR196A2-201ENST00000385189 110 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 MCFD2P1-201ENST00000417812 300 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 POLR2KP2-201ENST00000438155 177 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.78□□□□□ -2.53
SRP9P49458 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 RNU6-180P-201ENST00000516697 61 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 RNU2-60P-201ENST00000517290 128 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 AP002963.1-201ENST00000530590 184 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 RNU1-29P-201ENST00000606574 126 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 AL442067.1-201ENST00000613261 223 ntBASIC-0.78□□□□□ -2.53
SRP9P49458 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.79□□□□□ -2.54
SRP9P49458 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 MIR518F-201ENST00000384973 87 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 MIR501-201ENST00000390204 84 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 Z95118.1-201ENST00000421372 247 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.79□□□□□ -2.54
SRP9P49458 MTCYBP8-201ENST00000422855 651 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 RNU6-758P-201ENST00000516292 89 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 MTND4P7-201ENST00000523876 130 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.79□□□□□ -2.54
SRP9P49458 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.79□□□□□ -2.54
SRP9P49458 AC022306.2-201ENST00000617563 647 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.79□□□□□ -2.54
SRP9P49458 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.79□□□□□ -2.54
SRP9P49458 AC106754.1-201ENST00000562632 1513 ntBASIC-0.79□□□□□ -2.54
SRP9P49458 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 RNU4-30P-201ENST00000410245 143 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.8□□□□□ -2.54
SRP9P49458 MTCO2P16-201ENST00000436962 677 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 RNA5SP47-201ENST00000517230 109 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.8□□□□□ -2.54
SRP9P49458 AL121757.2-201ENST00000611223 313 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 MIR7844-201ENST00000616161 122 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 MIR4788-201ENST00000639104 80 ntBASIC-0.8□□□□□ -2.54
SRP9P49458 SNORA63C-201ENST00000364578 129 ntBASIC-0.81□□□□□ -2.54
SRP9P49458 RNU6-517P-201ENST00000384362 110 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms