Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NKX2-1P43699 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 Y_RNA.14-201ENST00000362415 103 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RNU4-80P-201ENST00000363200 141 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 SNORA16.1-201ENST00000364597 132 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 SNORA67.3-201ENST00000384366 140 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NKX2-1P43699 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RNA5SP511-201ENST00000410487 115 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RN7SKP192-201ENST00000411291 327 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-1P43699 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 SNORD2.1-201ENST00000458762 69 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RNU6-1132P-201ENST00000459214 107 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 SNORA59A-201ENST00000459326 152 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 AC091959.1-201ENST00000495857 238 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 RNU6-570P-201ENST00000517051 105 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-1P43699 AL512605.2-201ENST00000592972 256 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 U2.14-201ENST00000615943 113 ntBASIC1.54□□□□□ -2.16
NKX2-1P43699 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NKX2-1P43699 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NKX2-1P43699 SNORA25.1-201ENST00000362326 128 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 Y_RNA.20-201ENST00000362479 113 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 Y_RNA.44-201ENST00000362676 108 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 Y_RNA.172-201ENST00000363765 102 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 RNU6-674P-201ENST00000363831 107 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 SNORA72.4-201ENST00000384174 132 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 SNORA72-201ENST00000384339 132 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 MIR548H3-201ENST00000408771 118 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 RNU6-1186P-201ENST00000410429 97 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 Z98742.3-201ENST00000418637 326 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 Y_RNA.637-201ENST00000459424 114 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 RPS29P21-201ENST00000496272 170 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 RNU7-115P-201ENST00000516433 55 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 DEFB108E-201ENST00000524692 240 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-1P43699 AC073413.2-201ENST00000604332 360 ntBASIC1.53□□□□□ -2.16
NKX2-1P43699 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
NKX2-1P43699 Y_RNA.350-201ENST00000365409 98 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.52□□□□□ -2.17
NKX2-1P43699 SNORD116-13-201ENST00000384408 92 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 AL023284.1-201ENST00000403956 276 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 SNORA3.2-201ENST00000408221 125 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 RNU6-855P-201ENST00000410395 104 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 RPL39P38-201ENST00000467018 153 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.52□□□□□ -2.17
NKX2-1P43699 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.52□□□□□ -2.17
NKX2-1P43699 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-1P43699 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 AC012433.1-201ENST00000588916 398 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 BX284668.6-201ENST00000606899 438 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 ZNF355P-201ENST00000427301 3216 ntBASIC1.52□□□□□ -2.17
NKX2-1P43699 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NKX2-1P43699 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NKX2-1P43699 RNU6-1272P-201ENST00000362776 107 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 RNU6-899P-201ENST00000363947 107 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 Y_RNA.401-201ENST00000383965 117 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 Y_RNA.416-201ENST00000384014 113 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 RNU6-514P-201ENST00000384208 107 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 SNORA64-201ENST00000384674 134 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 RN7SKP200-201ENST00000410564 320 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 RN7SKP223-201ENST00000410582 62 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 AC104332.1-201ENST00000440471 797 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 HMGN2P23-201ENST00000456759 269 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.51□□□□□ -2.17
NKX2-1P43699 RNU6-1023P-201ENST00000516137 106 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
NKX2-1P43699 AC027419.1-201ENST00000522976 328 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR3618-201ENST00000580330 88 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR3145-201ENST00000580727 82 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 SNRPGP19-201ENST00000603826 189 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 MIR8054-201ENST00000620877 86 ntBASIC1.51□□□□□ -2.17
NKX2-1P43699 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.51□□□□□ -2.17
NKX2-1P43699 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
NKX2-1P43699 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
NKX2-1P43699 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NKX2-1P43699 RNY1-201ENST00000364228 113 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 RNU6-376P-201ENST00000384731 106 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AL445646.1-201ENST00000431784 216 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.5□□□□□ -2.17
NKX2-1P43699 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AC091021.1-201ENST00000468051 388 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 COX6CP14-201ENST00000469580 174 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 MTND1P19-201ENST00000511780 315 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AC127455.1-201ENST00000565496 145 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms