Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC011352.1-201ENST00000512300 793 ntBASIC-0.95□□□□□ -2.56
HTTP42858 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.95□□□□□ -2.56
HTTP42858 MTND1P7-201ENST00000632801 297 ntBASIC-0.95□□□□□ -2.56
HTTP42858 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.95□□□□□ -2.56
HTTP42858 MRPL42P3-201ENST00000401492 326 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RPL30P15-201ENST00000457129 321 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RNU7-182P-201ENST00000459009 62 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AGGF1P4-201ENST00000568249 801 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AC138915.2-201ENST00000569776 97 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AC245014.2-201ENST00000603689 287 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AP001330.5-201ENST00000607176 411 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AC090617.9-201ENST00000623751 147 ntBASIC-0.95□□□□□ -2.56
HTTP42858 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.95□□□□□ -2.56
HTTP42858 Z97988.1-201ENST00000637697 135 ntBASIC-0.95□□□□□ -2.56
HTTP42858 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RNU6-431P-201ENST00000383874 107 ntBASIC-0.95□□□□□ -2.56
HTTP42858 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RNU6-576P-201ENST00000390854 102 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AL590084.2-201ENST00000401481 382 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AC004386.2-201ENST00000441858 148 ntBASIC-0.95□□□□□ -2.56
HTTP42858 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.95□□□□□ -2.56
HTTP42858 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.95□□□□□ -2.56
HTTP42858 BNIP3P40-201ENST00000596017 556 ntBASIC-0.95□□□□□ -2.56
HTTP42858 BNIP3P39-201ENST00000601077 554 ntBASIC-0.95□□□□□ -2.56
HTTP42858 SNORA1-201ENST00000384107 130 ntBASIC-0.96□□□□□ -2.56
HTTP42858 RNU2-39P-201ENST00000410604 198 ntBASIC-0.96□□□□□ -2.56
HTTP42858 USMG5P1-201ENST00000425964 177 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC098614.3-201ENST00000438957 440 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.96□□□□□ -2.56
HTTP42858 SNORA25.13-201ENST00000516395 103 ntBASIC-0.96□□□□□ -2.56
HTTP42858 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.96□□□□□ -2.56
HTTP42858 snoZ196.1-201ENST00000625269 89 ntBASIC-0.96□□□□□ -2.56
HTTP42858 RNU6-509P-201ENST00000363519 107 ntBASIC-0.96□□□□□ -2.56
HTTP42858 MIR518F-201ENST00000384973 87 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC114491.1-201ENST00000416095 246 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AL353572.1-201ENST00000442490 417 ntBASIC-0.96□□□□□ -2.56
HTTP42858 U8.19-201ENST00000459095 133 ntBASIC-0.96□□□□□ -2.56
HTTP42858 RNU2-11P-201ENST00000459191 187 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.96□□□□□ -2.56
HTTP42858 SNORA43.2-201ENST00000516652 128 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC134698.4-201ENST00000523451 826 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AC090517.1-201ENST00000569307 266 ntBASIC-0.96□□□□□ -2.56
HTTP42858 MTND1P8-201ENST00000571424 950 ntBASIC-0.96□□□□□ -2.56
HTTP42858 AL356055.1-201ENST00000602528 446 ntBASIC-0.96□□□□□ -2.56
HTTP42858 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.96□□□□□ -2.56
HTTP42858 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RNU6-97P-201ENST00000363387 104 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.97□□□□□ -2.56
HTTP42858 MIR617-201ENST00000385030 97 ntBASIC-0.97□□□□□ -2.56
HTTP42858 AC008134.1-201ENST00000420943 193 ntBASIC-0.97□□□□□ -2.56
HTTP42858 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.56
HTTP42858 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.97□□□□□ -2.56
HTTP42858 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.97□□□□□ -2.56
HTTP42858 MTND1P11-201ENST00000456661 876 ntBASIC-0.97□□□□□ -2.56
HTTP42858 RPS29P24-201ENST00000486345 171 ntBASIC-0.97□□□□□ -2.56
HTTP42858 AC126544.2-201ENST00000625174 749 ntBASIC-0.97□□□□□ -2.56
HTTP42858 SNORD68-201ENST00000363214 84 ntBASIC-0.98□□□□□ -2.57
HTTP42858 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.98□□□□□ -2.57
HTTP42858 SNAP23P1-201ENST00000433229 246 ntBASIC-0.98□□□□□ -2.57
HTTP42858 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.98□□□□□ -2.57
HTTP42858 SNORA25.17-201ENST00000517184 124 ntBASIC-0.98□□□□□ -2.57
HTTP42858 DEFB108A-201ENST00000530110 222 ntBASIC-0.98□□□□□ -2.57
HTTP42858 AL445435.1-201ENST00000604232 665 ntBASIC-0.98□□□□□ -2.57
HTTP42858 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.98□□□□□ -2.57
HTTP42858 SNORD115-25-201ENST00000362619 82 ntBASIC-0.98□□□□□ -2.57
HTTP42858 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.98□□□□□ -2.57
HTTP42858 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
HTTP42858 MIR548H1-201ENST00000408610 102 ntBASIC-0.98□□□□□ -2.57
HTTP42858 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.98□□□□□ -2.57
HTTP42858 RNU7-134P-201ENST00000458997 64 ntBASIC-0.98□□□□□ -2.57
HTTP42858 MTND5P34-201ENST00000568888 325 ntBASIC-0.98□□□□□ -2.57
HTTP42858 MIR4491-201ENST00000581087 68 ntBASIC-0.98□□□□□ -2.57
HTTP42858 POLR3GP1-201ENST00000594073 261 ntBASIC-0.98□□□□□ -2.57
HTTP42858 MIR6740-201ENST00000618268 113 ntBASIC-0.98□□□□□ -2.57
HTTP42858 AC022306.3-201ENST00000619930 550 ntBASIC-0.98□□□□□ -2.57
HTTP42858 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.98□□□□□ -2.57
HTTP42858 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.98□□□□□ -2.57
HTTP42858 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.98□□□□□ -2.57
HTTP42858 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.98□□□□□ -2.57
HTTP42858 AL133153.1-201ENST00000557756 303 ntBASIC-0.98□□□□□ -2.57
HTTP42858 AC091948.2-201ENST00000636510 279 ntBASIC-0.98□□□□□ -2.57
HTTP42858 RNU6-527P-201ENST00000363425 104 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-621P-201ENST00000364752 109 ntBASIC-0.99□□□□□ -2.57
HTTP42858 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.99□□□□□ -2.57
HTTP42858 MIR570-201ENST00000384917 97 ntBASIC-0.99□□□□□ -2.57
HTTP42858 MTATP6P26-201ENST00000445926 662 ntBASIC-0.99□□□□□ -2.57
HTTP42858 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-953P-201ENST00000459154 107 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RPL30P10-201ENST00000488148 337 ntBASIC-0.99□□□□□ -2.57
HTTP42858 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-900P-201ENST00000384498 102 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-540P-201ENST00000384622 101 ntBASIC-0.99□□□□□ -2.57
HTTP42858 SNORA75.4-201ENST00000391278 119 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU2-9P-201ENST00000410194 145 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-855P-201ENST00000410395 104 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms