Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.26□□□□□ -2.21
HMGCLP35914 RNU6-407P-201ENST00000365280 104 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 Y_RNA.471-201ENST00000384312 102 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 MIR520G-201ENST00000385064 90 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 MIR1267-201ENST00000408723 78 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RNU6-101P-201ENST00000410323 104 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RN7SKP200-201ENST00000410564 320 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RPL23AP36-201ENST00000413895 458 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 AC091021.1-201ENST00000468051 388 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 OR9P1P-201ENST00000496431 281 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGCLP35914 RNU6-155P-201ENST00000516347 100 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RNU7-28P-201ENST00000516759 62 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 MIR4680-201ENST00000580906 66 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 RAC1P9-201ENST00000604990 392 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 AL513423.1-201ENST00000621695 132 ntBASIC1.25□□□□□ -2.21
HMGCLP35914 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
HMGCLP35914 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HMGCLP35914 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMGCLP35914 Y_RNA.172-201ENST00000363765 102 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 Y_RNA.216-201ENST00000364205 93 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 Y_RNA.310-201ENST00000365063 113 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 Y_RNA.368-201ENST00000365547 113 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 RNU6-937P-201ENST00000384325 106 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 COX6CP10-201ENST00000416832 224 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC005534.2-201ENST00000431047 433 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AL603825.1-201ENST00000438481 80 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 HMGN1P10-201ENST00000474557 553 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGCLP35914 AP002004.2-201ENST00000531656 154 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 RPL21P9-201ENST00000556149 474 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC113195.1-201ENST00000579952 141 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 MIR4300-201ENST00000581016 96 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC124312.5-201ENST00000604451 268 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 AC004832.4-201ENST00000608952 331 ntBASIC1.24□□□□□ -2.21
HMGCLP35914 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HMGCLP35914 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGCLP35914 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGCLP35914 AL442644.1-201ENST00000454390 3105 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HMGCLP35914 MIRLET7C-201ENST00000362160 84 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 RNA5SP432-201ENST00000362480 116 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 SNORA1B-201ENST00000362535 133 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 SNORD1A-201ENST00000364968 72 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 Y_RNA.329-201ENST00000365209 107 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 SNORA33.2-201ENST00000365413 134 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 Y_RNA.424-201ENST00000384063 103 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 SNORD116-13-201ENST00000384408 92 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 RNA5SP511-201ENST00000410487 115 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCLP35914 PGBD4P5-201ENST00000445958 426 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 RNU6-1137P-201ENST00000517073 99 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 RNU6-897P-201ENST00000517135 105 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 AL355297.3-201ENST00000604082 446 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 AC011373.1-201ENST00000607270 237 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.23□□□□□ -2.21
HMGCLP35914 Y_RNA.136-201ENST00000363444 102 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 Y_RNA.143-201ENST00000363520 106 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 Y_RNA.202-201ENST00000364083 110 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 Y_RNA.455-201ENST00000384230 98 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 RNU6-710P-201ENST00000410424 105 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 RNU6-121P-201ENST00000410525 99 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCLP35914 RPS4XP11-201ENST00000446897 772 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 RPS20P10-201ENST00000451209 253 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 RNU6-496P-201ENST00000516145 99 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 RNU6-63P-201ENST00000516690 95 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCLP35914 MIR3124-201ENST00000582636 67 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 MIR4762-201ENST00000585261 75 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 SNORA28-201ENST00000606769 126 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 SNORD113-5-201ENST00000607261 78 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 AC040896.1-201ENST00000613819 479 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
HMGCLP35914 AL391987.6-201ENST00000305671 199 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.105-201ENST00000363182 111 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.153-201ENST00000363615 91 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.214-201ENST00000364201 112 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 U8.5-201ENST00000364528 136 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.331-201ENST00000365267 102 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNU6-1323P-201ENST00000384025 107 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.456-201ENST00000384232 111 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNU6-424P-201ENST00000384367 105 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNU6-376P-201ENST00000384731 106 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 Y_RNA.581-201ENST00000391017 97 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNA5SP482-201ENST00000391269 118 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 HSPE1P25-201ENST00000455484 251 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 AL049830.1-201ENST00000468034 425 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 SEPT14P8-201ENST00000508026 178 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNU6-1046P-201ENST00000516538 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms